RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 OR4F15Q8NGB8 312 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 OR2G3Q8NGZ4 309 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 OR51Q1Q8NH59 317 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 OR6X1Q8NH79 312 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 STAG3L4Q8TBR4 150 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 PSMF1Q92530 271 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 SLC38A4Q969I6 547 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 PRAP1Q96NZ9 151 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 OR2M2Q96R28 347 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 CENPKQ9BS16 269 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 SHCBP1LQ9BZQ2 653 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 FAM192AQ9GZU8 254 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 VCXQ9H320 206 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 TRIM45Q9H8W5 580 aaPredicted RBP2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 NEK6Q9HC98 313 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 ZNF160Q9HCG1 818 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 LYRM4Q9HD34 91 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 SAR1AQ9NR31 198 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 LYARQ9NX58 379 aaKnown RBP2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 OPTCQ9UBM4 332 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 RPS6KB2Q9UBS0 482 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 LGALS13Q9UHV8 139 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 ZNF225Q9UK10 706 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 SLC22A14Q9Y267 594 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 ARL2BPQ9Y2Y0 163 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 ANKRD17O75179 2603 aaKnown RBP2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 A0A075B6Q4 140 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 TRBV11-1A0A0K0K1C0 115 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 ZNF860A6NHJ4 632 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 ZNF726A6NNF4 738 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 C4orf51C9J302 202 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 H0Y9J4 135 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 H0YIV9 168 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 PEX7O00628 323 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 DLGAP1O14490 977 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 ERI3O43414 337 aaKnown RBP2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 CHST10O43529 356 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 SMIM24O75264 130 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 CDH16O75309 829 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 EIF3GO75821 320 aaKnown RBP eCLIP2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 DCTN3O75935 186 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 MOSP00540 346 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 RBP1P09455 135 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 IFI6P09912 130 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 GKN3PP0CG01 181 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 IGHV3-43DP0DP04 118 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 GFAPP14136 432 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 NQO1P15559 274 aaKnown RBP2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 SSR2P43308 183 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 OR4D2P58180 307 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 ARG2P78540 354 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 IRF8Q02556 426 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 ZNF92Q03936 586 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 DOC2AQ14183 400 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 OR4D1Q15615 310 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 UAP1Q16222 522 aaPredicted RBP2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 KCTD19Q17RG1 926 aaPredicted RBP2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 DEFB134Q4QY38 66 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 C2orf83Q53S99 150 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 TMEM255AQ5JRV8 349 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 MED27Q6P2C8 311 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 C19orf35Q6ZS72 473 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 SHISA6Q6ZSJ9 500 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 CMC1Q7Z7K0 106 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 CRLF3Q8IUI8 442 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 SNX31Q8N9S9 440 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 MORN4Q8NDC4 146 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 MDS2Q8NDY4 140 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 OR8K3Q8NH51 312 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 SLC22A8Q8TCC7 542 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 ACMSDQ8TDX5 336 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 DCAKDQ8WVC6 231 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 KCTD4Q8WVF5 259 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 TSLPQ969D9 159 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 C8orf44Q96CB5 159 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 MS4A6EQ96DS6 147 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 TSNARE1Q96NA8 513 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 RARRES2Q99969 163 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 HES7Q9BYE0 225 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 AICDAQ9GZX7 198 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 PRTFDC1Q9NRG1 225 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 MS4A12Q9NXJ0 267 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 NUFIP1Q9UHK0 495 aaKnown RBP2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 KLF13Q9Y2Y9 288 aaPredicted RBP2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 ACOT9Q9Y305 439 aa2.66□□□□□ -1.98
CDC42BPA-212ENST00000478573 SETXQ7Z333 2677 aaKnown RBP2.65□□□□□ -1.98
CDC42BPA-212ENST00000478573 NBPF19A0A087WUL8 3843 aa2.65□□□□□ -1.98
CDC42BPA-212ENST00000478573 NAV2Q8IVL1 2488 aa2.65□□□□□ -1.98
CDC42BPA-212ENST00000478573 A0A0A6YYD5 115 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 IGKV1D-13A0A0B4J2D9 117 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 A0A1B0GUH1 482 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 EXOC1LA0A1B0GW35 172 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 SMCO3A2RU48 225 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 PINLYPA6NC86 204 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 NCF1BA6NI72 391 aaPredicted RBP2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 GABRR3A8MPY1 467 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 A8MT66 165 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 NCF1CA8MVU1 366 aaPredicted RBP2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 PLPP1O14494 284 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 MRPS12O15235 138 aaKnown RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms