RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 SLC25A40Q8TBP6 338 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 PNPT1Q8TCS8 783 aaKnown RBP3.3□□□□□ -1.88
VPS50-214ENST00000477935 MYDGFQ969H8 173 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 CFAP36Q96G28 342 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 OR5M11Q96RB7 305 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 RAB40CQ96S21 281 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 ULBP2Q9BZM5 246 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 OR2J1Q9GZK6 312 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 ELOVL3Q9HB03 270 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 POLE3Q9NRF9 147 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 GLS2Q9UI32 602 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 PCTPQ9UKL6 214 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 TEX264Q9Y6I9 313 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 KIF25-AS1Q9Y6Z4 181 aa3.3□□□□□ -1.88
VPS50-214ENST00000477935 NUP214P35658 2090 aaPredicted RBP3.29□□□□□ -1.88
VPS50-214ENST00000477935 DYNC1H1Q14204 4646 aaKnown RBP3.29□□□□□ -1.88
VPS50-214ENST00000477935 CFAP73A6NFT4 308 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 VGLL3A8MV65 326 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 AIM2O14862 343 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 FCMRO60667 390 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 NPIPB7O75200 414 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 SMIM24O75264 130 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 AHSA1O95433 338 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 CYB5R3P00387 301 aaPredicted RBP3.29□□□□□ -1.88
VPS50-214ENST00000477935 RBP1P09455 135 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 PNMTP11086 282 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 GSTM3P21266 225 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 KITLGP21583 273 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 CCNOP22674 350 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 STOMP27105 288 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 MPV17P39210 176 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 GDI2P50395 445 aaKnown RBP3.29□□□□□ -1.88
VPS50-214ENST00000477935 STX1BP61266 288 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 COPZ1P61923 177 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 PPP1CBP62140 327 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 HSF2Q03933 536 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 PSG7Q13046 419 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 GNA13Q14344 377 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 GK2Q14410 553 aaPredicted RBP3.29□□□□□ -1.88
VPS50-214ENST00000477935 C17orf58Q2M2W7 97 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 SMU1Q2TAY7 513 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 AARDQ4LEZ3 155 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 SLC22A6Q4U2R8 563 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 FAM27D1Q5T7N8 215 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 C1orf140Q5VVS0 124 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 C5orf46Q6UWT4 87 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 LYPD2Q6UXB3 125 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 LINC00336Q6ZUF6 198 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 SLC16A14Q7RTX9 510 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 KDM8Q8N371 416 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 BEST4Q8NFU0 473 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 SLC26A10Q8NG04 563 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 OR52H1Q8NGJ2 320 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 OR11L1Q8NGX0 322 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 OR13G1Q8NGZ3 307 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 CLHC1Q8NHS4 586 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 CDC26Q8NHZ8 85 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 PSMA8Q8TAA3 256 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 MAGOHBQ96A72 148 aaKnown RBP3.29□□□□□ -1.88
VPS50-214ENST00000477935 PPCDCQ96CD2 204 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 P2RX4Q99571 388 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 SLC5A7Q9GZV3 580 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 REEP4Q9H6H4 257 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 CELA1Q9UNI1 258 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 CHMP2BQ9UQN3 213 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 VPS13DQ5THJ4 4388 aa3.29□□□□□ -1.88
VPS50-214ENST00000477935 SORL1Q92673 2214 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 SRRM2Q9UQ35 2752 aaKnown RBP3.28□□□□□ -1.88
VPS50-214ENST00000477935 TRAV38-1A0A0B4J264 116 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 A0A1W2PRV1 198 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 C5orf49A4QMS7 147 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 FTCDNL1E5RQL4 147 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 LSM1O15116 133 aaKnown RBP3.28□□□□□ -1.88
VPS50-214ENST00000477935 CHST1O43916 411 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 OR10H3O60404 316 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 BANF1O75531 89 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 KLHL2O95198 593 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 GSTA2P09210 222 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 UMPSP11172 480 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 HMOX2P30519 316 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 CSNK1A1P48729 337 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 FNTAP49354 379 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 CRMP1Q14194 572 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 SELPLGQ14242 412 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 MEF2DQ14814 521 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 MAPK14Q16539 360 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 SPATA46Q5T0L3 261 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 UTF1Q5T230 341 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 ATAD3BQ5T9A4 648 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 CCDC137Q6PK04 289 aaKnown RBP3.28□□□□□ -1.88
VPS50-214ENST00000477935 ZNF600Q6ZNG1 722 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 CENPLQ8N0S6 344 aaPredicted RBP3.28□□□□□ -1.88
VPS50-214ENST00000477935 RPP25LQ8N5L8 163 aaKnown RBP3.28□□□□□ -1.88
VPS50-214ENST00000477935 GVQW1Q8N7I0 195 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 LY6G5BQ8NDX9 201 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 PIFOQ8TCI5 191 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 TSEN15Q8WW01 171 aaKnown RBP3.28□□□□□ -1.88
VPS50-214ENST00000477935 OR5P2Q8WZ92 322 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 TNFRSF14Q92956 283 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 CIDECQ96AQ7 238 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms