RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 FAM90A5PA8MXJ8 464 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 ODF3BA8MYP8 253 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 FAM25EA8MYX2 175 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 TOMM40O96008 361 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 RENP00797 406 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 HLA-DQA2P01906 255 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 FAM90A15PP0C7V4 464 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 FAM90A14PP0C7W9 464 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 TROVE2P10155 538 aaKnown RBP eCLIP3.64□□□□□ -1.83
CKS1B-207ENST00000477676 CCL3L1P16619 93 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 COX7A1P24310 79 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 ARL3P36405 182 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 CEBPDP49716 269 aaPredicted RBP3.64□□□□□ -1.83
CKS1B-207ENST00000477676 SLC7A2P52569 658 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 EMX1Q04741 257 aaPredicted RBP3.64□□□□□ -1.83
CKS1B-207ENST00000477676 ZNF273Q14593 569 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 ZIK1Q3SY52 487 aaPredicted RBP3.64□□□□□ -1.83
CKS1B-207ENST00000477676 SLC36A3Q495N2 470 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 LRRC10Q5BKY1 277 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 METTL21CQ5VZV1 264 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 NCR3LG1Q68D85 454 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 C11orf88Q6PI97 169 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 DNM1P34Q6PK57 102 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 TCF23Q7RTU1 214 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 KCTD20Q7Z5Y7 419 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 OR8H2Q8N162 312 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 SLC37A3Q8NCC5 494 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 OR4S1Q8NGB4 309 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 OR51G2Q8NGK0 314 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 OR10Z1Q8NGY1 313 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 OR2AJ1Q8NGZ0 328 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 OR8S1Q8NH09 359 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 OR5P3Q8WZ94 311 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 LZICQ8WZA0 190 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 SPTSSAQ969W0 71 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 SLAMF6Q96DU3 332 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 RNF125Q96EQ8 232 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 SDSLQ96GA7 329 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 REEP6Q96HR9 211 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 ATP6V1G3Q96LB4 118 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 ZNF488Q96MN9 340 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 SH3GL1Q99961 368 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 B9D2Q9BPU9 175 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 COPS4Q9BT78 406 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 IFT27Q9BW83 186 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 NMNAT2Q9BZQ4 307 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 NPFFR1Q9GZQ6 430 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 DNTTIP1Q9H147 329 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 MUC13Q9H3R2 512 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 EGLN3Q9H6Z9 239 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 CENPMQ9NSP4 180 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 INTS9Q9NV88 658 aaKnown RBP3.64□□□□□ -1.83
CKS1B-207ENST00000477676 MDFICQ9P1T7 246 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 KCNG2Q9UJ96 466 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 TCF19Q9Y242 345 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 NOP16Q9Y3C1 178 aaKnown RBP3.64□□□□□ -1.83
CKS1B-207ENST00000477676 DNAH2Q9P225 4427 aa3.64□□□□□ -1.83
CKS1B-207ENST00000477676 A0A1W2PQ09 198 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 SH2D7A6NKC9 451 aaPredicted RBP3.63□□□□□ -1.83
CKS1B-207ENST00000477676 ANKRD30BLA7E2S9 258 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 ZNF850A8MQ14 1090 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 BBIP1A8MTZ0 92 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 H0YAE9 185 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 ZNF593O00488 134 aaPredicted RBP3.63□□□□□ -1.83
CKS1B-207ENST00000477676 XRCC2O43543 280 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 SYNGR1O43759 233 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 IDH3BO43837 385 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 TPPPO94811 219 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 VIMP08670 466 aaKnown RBP3.63□□□□□ -1.83
CKS1B-207ENST00000477676 SPARCP09486 303 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 TMEM225BP0DP42 221 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 ZNF823P16415 610 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 SLC6A6P31641 620 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 IFNA8P32881 189 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 DDOSTP39656 456 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 OPRL1P41146 370 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 NAA10P41227 235 aaPredicted RBP3.63□□□□□ -1.83
CKS1B-207ENST00000477676 GABRA2P47869 451 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 CX3CR1P49238 355 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 ENTPD1P49961 510 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 CCR9P51686 369 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 ZNF121P58317 390 aaPredicted RBP3.63□□□□□ -1.83
CKS1B-207ENST00000477676 RPP30P78346 268 aaKnown RBP3.63□□□□□ -1.83
CKS1B-207ENST00000477676 PRDX4Q13162 271 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 CRMP1Q14194 572 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 DEFB121Q5J5C9 76 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 TEX30Q5JUR7 227 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 ZNF770Q6IQ21 691 aaPredicted RBP3.63□□□□□ -1.83
CKS1B-207ENST00000477676 CCDC121Q6ZUS5 278 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 FAM57BQ71RH2 274 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 RRM2BQ7LG56 351 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 KRT74Q7RTS7 529 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 FAM185AQ8N0U4 392 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 TMEM185AQ8NFB2 350 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 PROKR2Q8NFJ6 384 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 OR4F17Q8NGA8 305 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 OR5AU1Q8NGC0 362 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 OR4M1Q8NGD0 313 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 OR9Q2Q8NGE9 314 aa3.63□□□□□ -1.83
CKS1B-207ENST00000477676 OR5D13Q8NGL4 314 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms