RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 KLK2P20151 261 aa13.34□□□□□ -0.27
CLSTN1-205ENST00000477264 FMODQ06828 376 aa13.34□□□□□ -0.27
CLSTN1-205ENST00000477264 SLC10A1Q14973 349 aa13.34□□□□□ -0.27
CLSTN1-205ENST00000477264 CYB561D1Q8N8Q1 229 aa13.34□□□□□ -0.27
CLSTN1-205ENST00000477264 TMEM105Q8N8V8 129 aa13.34□□□□□ -0.27
CLSTN1-205ENST00000477264 GPR87Q9BY21 358 aa13.34□□□□□ -0.27
CLSTN1-205ENST00000477264 CTDSP1Q9GZU7 261 aa13.34□□□□□ -0.27
CLSTN1-205ENST00000477264 CDH20Q9HBT6 801 aa13.34□□□□□ -0.27
CLSTN1-205ENST00000477264 CRLF2Q9HC73 371 aa13.34□□□□□ -0.27
CLSTN1-205ENST00000477264 ZNF701Q9NV72 531 aaPredicted RBP13.34□□□□□ -0.27
CLSTN1-205ENST00000477264 LIPGQ9Y5X9 500 aa13.34□□□□□ -0.27
CLSTN1-205ENST00000477264 C17orf105B2RV13 164 aa13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 PHOX2AO14813 284 aa13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 XRCC2O43543 280 aa13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 GZMBP10144 247 aa13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 ATP6V0CP27449 155 aa13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 NOVA1P51513 510 aaKnown RBP13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 PIGPP57054 158 aa13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 TLE4Q04727 773 aa13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 ERV3-1Q14264 604 aa13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 HAGHQ16775 308 aa13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 ABCA11PQ4W5N1 156 aa13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 COA6Q5JTJ3 125 aaKnown RBP13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 C11orf40Q8WZ69 217 aa13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 R3HDM4Q96D70 268 aa13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 JSRP1Q96MG2 331 aaPredicted RBP13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 SPACA5Q96QH8 159 aa13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 ADOQ96SZ5 270 aa13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 ZNF700Q9H0M5 742 aa13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 PILRBQ9UKJ0 227 aa13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 WASF3Q9UPY6 502 aa13.33□□□□□ -0.28
CLSTN1-205ENST00000477264 LILRA5A6NI73 299 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 CRYABP02511 175 aaKnown RBP13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 ZNF43P17038 809 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 CSNK1A1P48729 337 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 SRPXP78539 464 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 OGFOD3Q6PK18 319 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 ABHD12BQ7Z5M8 362 aaPredicted RBP13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 MRPL52Q86TS9 123 aaKnown RBP13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 COMMD2Q86X83 199 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 FBXL14Q8N1E6 418 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 SLC38A9Q8NBW4 561 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 HSF4Q9ULV5 492 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 TNRC6BQ9UPQ9 1833 aaKnown RBP13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 A0A1B0GV50 99 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 A0A1W2PP11 408 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 DIRAS3O95661 229 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 CDS2O95674 445 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 QDPRP09417 244 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 GIMD1P0DJR0 217 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 ZNF728P0DKX0 622 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 CEACAM1P13688 526 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 SLC16A14Q7RTX9 510 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 C17orf82Q86X59 251 aaPredicted RBP13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 OR2C3Q8N628 320 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 OR4D5Q8NGN0 318 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 OR10S1Q8NGN2 331 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 CLDND2Q8NHS1 167 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 NECAP2Q9NVZ3 263 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 KLHL13Q9P2N7 655 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 ANXA10Q9UJ72 324 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 CBY1Q9Y3M2 126 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 NCOR1O75376 2440 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 ADAMTS9Q9P2N4 1935 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 ALPK2Q86TB3 2170 aa13.32□□□□□ -0.28
CLSTN1-205ENST00000477264 TRAV1-1A0A0B4J248 108 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 A0A1B0GU03 582 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 COX5BP10606 129 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 CCL20P78556 96 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 TNFRSF9Q07011 255 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 DEFB110Q30KQ9 67 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 CCDC71LQ8N9Z2 235 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 OR8B12Q8NGG6 310 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 RTN4IP1Q8WWV3 396 aaPredicted RBP13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 C11orf1Q9H5F2 150 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 ZDBF2Q9HCK1 2354 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 LOC102723971A0A1B0GUV8 181 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 DTYMKP23919 212 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 CAPZBP47756 277 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 CEBPGP53567 150 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 SLC25A26Q70HW3 274 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 RNF144BQ7Z419 303 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 ZNF664Q8N3J9 261 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 ZFP62Q8NB50 900 aaPredicted RBP13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 OR1P1Q8NH06 330 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 ADIPOR1Q96A54 375 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 DNAJA3Q96EY1 480 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 SNX22Q96L94 193 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 SPIN2AQ99865 258 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 SPIN2BQ9BPZ2 258 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 FAM60AQ9NP50 221 aa13.31□□□□□ -0.28
CLSTN1-205ENST00000477264 BDP1A6H8Y1 2624 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 PI4KAP42356 2102 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 MS4A18H0YCH9 400 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 TSPAN2O60636 221 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 AMBPP02760 352 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 CFIP05156 583 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 HLA-DOBP13765 273 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 CD200P41217 278 aa13.3□□□□□ -0.28
CLSTN1-205ENST00000477264 PPP1CAP62136 330 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms