RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 ZNF146Q15072 292 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 ODF4Q2M2E3 257 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 BAIAP2L2Q6UXY1 529 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 SLC25A26Q70HW3 274 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 GID4Q8IVV7 300 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 ZNF676Q8N7Q3 588 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 CCDC54Q8NEL0 328 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 SGCDQ92629 289 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 IL4I1Q96RQ9 567 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 CLEC7AQ9BXN2 247 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 CHST6Q9GZX3 395 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 GABARAPL1Q9H0R8 117 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 PLEKHA1Q9HB21 404 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 KRT84Q9NSB2 600 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 RBFOX1Q9NWB1 397 aaKnown RBP10.49□□□□□ -0.73
MRPL55-228ENST00000476267 SLC7A11Q9UPY5 501 aa10.49□□□□□ -0.73
MRPL55-228ENST00000476267 TRBV2A0A0J9YWF9 115 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 METTL15A6NJ78 407 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 H3BSH0 61 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 ENTPD6O75354 484 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 GATBO75879 557 aaKnown RBP10.48□□□□□ -0.73
MRPL55-228ENST00000476267 SULT1C4O75897 302 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 IGLV1-47P01700 117 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 AMY1AP04745 511 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 AMY2AP04746 511 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 KRT8P05787 483 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 OR2T7P0C7T2 308 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 IGLL1P15814 213 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 ERP29P30040 261 aaKnown RBP10.48□□□□□ -0.73
MRPL55-228ENST00000476267 KIR3DL2P43630 455 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 OR3A1P47881 315 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 SLC34A1Q06495 639 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 GRK1Q15835 563 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 DNAL1Q4LDG9 190 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 C16orf82Q7Z2V1 217 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 EGFL6Q8IUX8 553 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 Q8IYB0 196 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 YIPF7Q8N8F6 280 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 DNAAF1Q8NEP3 725 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 OR5AU1Q8NGC0 362 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 EMG1Q92979 244 aaKnown RBP10.48□□□□□ -0.73
MRPL55-228ENST00000476267 C10orf35Q96D05 121 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 BORCS8Q96FH0 119 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 TBX5Q99593 518 aa10.48□□□□□ -0.73
MRPL55-228ENST00000476267 H2AFY2Q9P0M6 372 aaPredicted RBP10.48□□□□□ -0.73
MRPL55-228ENST00000476267 WARS2Q9UGM6 360 aaKnown RBP10.48□□□□□ -0.73
MRPL55-228ENST00000476267 LOC107986453A0A1B0GWG9 222 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 MGST3O14880 152 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 GYG2O15488 501 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 DNAJC8O75937 253 aaPredicted RBP10.47□□□□□ -0.73
MRPL55-228ENST00000476267 INMTO95050 263 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 ALDOBP05062 364 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 BCL3P20749 454 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 PEX2P28328 305 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 HTR1FP30939 366 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 GDNFP39905 211 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 P2RX3P56373 397 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 BDH1Q02338 343 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 ATP6AP1Q15904 470 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 SPIN3Q5JUX0 258 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 ZBTB49Q6ZSB9 765 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 ENTHD1Q8IYW4 607 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 FAM58AQ8N1B3 248 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 PP6455Q8WZ26 134 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 CORO2AQ92828 525 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 ADAT3Q96EY9 351 aaPredicted RBP10.47□□□□□ -0.73
MRPL55-228ENST00000476267 LIN7BQ9HAP6 207 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 HHLA2Q9UM44 414 aa10.47□□□□□ -0.73
MRPL55-228ENST00000476267 UBE2J1Q9Y385 318 aaPredicted RBP10.47□□□□□ -0.73
MRPL55-228ENST00000476267 IGKV1-12A0A0C4DH73 117 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 G3V2T6 193 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 K7EIL1 84 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 PEX14O75381 377 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 APOL3O95236 402 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 IGKV1D-12P01611 117 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 UBCP0CG48 685 aaKnown RBP10.46□□□□□ -0.73
MRPL55-228ENST00000476267 GABRR1P24046 479 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 LMO1P25800 156 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 HTR1DP28221 377 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 DUSP1P28562 367 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 CD34P28906 385 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 RBP2P50120 134 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 ZNF85Q03923 595 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 IL18R1Q13478 541 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 C10orf99Q6UWK7 81 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 HEPN1Q6WQI6 88 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 RDH10Q8IZV5 341 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 NDNFQ8TB73 568 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 HMG20AQ9NP66 347 aa10.46□□□□□ -0.73
MRPL55-228ENST00000476267 A0A087X0M5 115 aa10.45□□□□□ -0.74
MRPL55-228ENST00000476267 A0A1B0GX30 115 aa10.45□□□□□ -0.74
MRPL55-228ENST00000476267 A0A1W2PRX2 142 aa10.45□□□□□ -0.74
MRPL55-228ENST00000476267 LY6LH3BQJ8 138 aa10.45□□□□□ -0.74
MRPL55-228ENST00000476267 OR2F2O95006 317 aa10.45□□□□□ -0.74
MRPL55-228ENST00000476267 OR2H2O95918 312 aa10.45□□□□□ -0.74
MRPL55-228ENST00000476267 CD33P20138 364 aa10.45□□□□□ -0.74
MRPL55-228ENST00000476267 CD24P25063 80 aa10.45□□□□□ -0.74
MRPL55-228ENST00000476267 POLR2IP36954 125 aaKnown RBP10.45□□□□□ -0.74
MRPL55-228ENST00000476267 CDC42P60953 191 aa10.45□□□□□ -0.74
MRPL55-228ENST00000476267 UTF1Q5T230 341 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms