RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 TIMP3P35625 211 aa18.65■□□□□ 0.58
CCM2-206ENST00000474617 IDH3GP51553 393 aaPredicted RBP18.65■□□□□ 0.58
CCM2-206ENST00000474617 UCP2P55851 309 aa18.65■□□□□ 0.58
CCM2-206ENST00000474617 UCP3P55916 312 aa18.65■□□□□ 0.58
CCM2-206ENST00000474617 FAM76BQ5HYJ3 339 aa18.65■□□□□ 0.58
CCM2-206ENST00000474617 ZNF585AQ6P3V2 769 aa18.65■□□□□ 0.58
CCM2-206ENST00000474617 ADAD2Q8NCV1 583 aaKnown RBP18.65■□□□□ 0.58
CCM2-206ENST00000474617 BCL2L14Q9BZR8 327 aa18.65■□□□□ 0.58
CCM2-206ENST00000474617 DKK4Q9UBT3 224 aa18.65■□□□□ 0.58
CCM2-206ENST00000474617 OR5H14A6NHG9 310 aa18.64■□□□□ 0.58
CCM2-206ENST00000474617 TNFSF13O75888 250 aa18.64■□□□□ 0.58
CCM2-206ENST00000474617 CGAP01215 116 aa18.64■□□□□ 0.58
CCM2-206ENST00000474617 CTXN2P0C2S0 81 aa18.64■□□□□ 0.58
CCM2-206ENST00000474617 BCL3P20749 454 aa18.64■□□□□ 0.58
CCM2-206ENST00000474617 S100A11P31949 105 aa18.64■□□□□ 0.58
CCM2-206ENST00000474617 GLP1RP43220 463 aa18.64■□□□□ 0.58
CCM2-206ENST00000474617 RBM39Q14498 530 aaKnown RBP18.64■□□□□ 0.58
CCM2-206ENST00000474617 OPCMLQ14982 345 aa18.64■□□□□ 0.58
CCM2-206ENST00000474617 DCAF12L2Q5VW00 463 aa18.64■□□□□ 0.58
CCM2-206ENST00000474617 ZNF660Q6AZW8 331 aaPredicted RBP18.64■□□□□ 0.58
CCM2-206ENST00000474617 GSG1LQ6UXU4 331 aa18.64■□□□□ 0.58
CCM2-206ENST00000474617 ZNF680Q8NEM1 530 aa18.64■□□□□ 0.58
CCM2-206ENST00000474617 SLAMF9Q96A28 289 aa18.64■□□□□ 0.58
CCM2-206ENST00000474617 RTBDNQ9BSG5 229 aaPredicted RBP18.64■□□□□ 0.58
CCM2-206ENST00000474617 NMES1Q9C002 83 aa18.64■□□□□ 0.58
CCM2-206ENST00000474617 OR51I2Q9H344 312 aa18.64■□□□□ 0.58
CCM2-206ENST00000474617 MAB21L2Q9Y586 359 aa18.64■□□□□ 0.58
CCM2-206ENST00000474617 GVINP1Q7Z2Y8 2422 aa18.64■□□□□ 0.57
CCM2-206ENST00000474617 A0A0D9SG52 128 aa18.64■□□□□ 0.57
CCM2-206ENST00000474617 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.64■□□□□ 0.57
CCM2-206ENST00000474617 KIR2DS1A0A191URI9 304 aa18.64■□□□□ 0.57
CCM2-206ENST00000474617 TSC22D2O75157 780 aa18.64■□□□□ 0.57
CCM2-206ENST00000474617 SIX6O95475 246 aa18.64■□□□□ 0.57
CCM2-206ENST00000474617 PGAM2P15259 253 aa18.64■□□□□ 0.57
CCM2-206ENST00000474617 KIR2DS4P43632 304 aa18.64■□□□□ 0.57
CCM2-206ENST00000474617 ZNF345Q14585 488 aa18.64■□□□□ 0.57
CCM2-206ENST00000474617 KIR2DS1Q14954 304 aa18.64■□□□□ 0.57
CCM2-206ENST00000474617 RBMXL3Q8N7X1 1067 aaKnown RBP18.64■□□□□ 0.57
CCM2-206ENST00000474617 STARD4Q96DR4 205 aa18.64■□□□□ 0.57
CCM2-206ENST00000474617 PIK3IP1Q96FE7 263 aa18.64■□□□□ 0.57
CCM2-206ENST00000474617 ZNF2Q9BSG1 426 aaPredicted RBP18.64■□□□□ 0.57
CCM2-206ENST00000474617 FGF23Q9GZV9 251 aaPredicted RBP18.64■□□□□ 0.57
CCM2-206ENST00000474617 ZNF71Q9NQZ8 489 aaPredicted RBP18.64■□□□□ 0.57
CCM2-206ENST00000474617 MTCH1Q9NZJ7 389 aa18.64■□□□□ 0.57
CCM2-206ENST00000474617 TRBV6-6A0A0A6YYG2 114 aa18.63■□□□□ 0.57
CCM2-206ENST00000474617 H7C1Q1 480 aa18.63■□□□□ 0.57
CCM2-206ENST00000474617 IGLV1-44P01699 117 aa18.63■□□□□ 0.57
CCM2-206ENST00000474617 NPBWR2P48146 333 aa18.63■□□□□ 0.57
CCM2-206ENST00000474617 MZT1Q08AG7 82 aa18.63■□□□□ 0.57
CCM2-206ENST00000474617 C1orf185Q5T7R7 199 aa18.63■□□□□ 0.57
CCM2-206ENST00000474617 OR2T2Q6IF00 324 aa18.63■□□□□ 0.57
CCM2-206ENST00000474617 VWA1Q6PCB0 445 aa18.63■□□□□ 0.57
CCM2-206ENST00000474617 WDR31Q8NA23 367 aa18.63■□□□□ 0.57
CCM2-206ENST00000474617 SPERTQ8NA61 448 aa18.63■□□□□ 0.57
CCM2-206ENST00000474617 EXTL1Q92935 676 aa18.63■□□□□ 0.57
CCM2-206ENST00000474617 TMEM230Q96A57 120 aa18.63■□□□□ 0.57
CCM2-206ENST00000474617 UBQLN2Q9UHD9 624 aa18.63■□□□□ 0.57
CCM2-206ENST00000474617 DOCK7Q96N67 2140 aa18.63■□□□□ 0.57
CCM2-206ENST00000474617 ZFHX2Q9C0A1 2572 aaPredicted RBP18.62■□□□□ 0.57
CCM2-206ENST00000474617 SDCBPO00560 298 aaPredicted RBP18.62■□□□□ 0.57
CCM2-206ENST00000474617 HAGHLQ6PII5 290 aaPredicted RBP18.62■□□□□ 0.57
CCM2-206ENST00000474617 FAM180AQ6UWF9 173 aa18.62■□□□□ 0.57
CCM2-206ENST00000474617 CLEC18BQ6UXF7 455 aa18.62■□□□□ 0.57
CCM2-206ENST00000474617 SGPP2Q8IWX5 399 aa18.62■□□□□ 0.57
CCM2-206ENST00000474617 CASTOR1Q8WTX7 329 aa18.62■□□□□ 0.57
CCM2-206ENST00000474617 USB1Q9BQ65 265 aaKnown RBP18.62■□□□□ 0.57
CCM2-206ENST00000474617 SFXN3Q9BWM7 321 aa18.62■□□□□ 0.57
CCM2-206ENST00000474617 C1orf123Q9NWV4 160 aa18.62■□□□□ 0.57
CCM2-206ENST00000474617 TREM2Q9NZC2 230 aa18.62■□□□□ 0.57
CCM2-206ENST00000474617 FXYD6-FXYD2A0A087WZ82 144 aa18.61■□□□□ 0.57
CCM2-206ENST00000474617 OR5H1A6NKK0 313 aa18.61■□□□□ 0.57
CCM2-206ENST00000474617 RP2O75695 350 aa18.61■□□□□ 0.57
CCM2-206ENST00000474617 OR2F2O95006 317 aa18.61■□□□□ 0.57
CCM2-206ENST00000474617 NAPSAO96009 420 aa18.61■□□□□ 0.57
CCM2-206ENST00000474617 IFNA2P01563 188 aa18.61■□□□□ 0.57
CCM2-206ENST00000474617 MDH2P40926 338 aaKnown RBP18.61■□□□□ 0.57
CCM2-206ENST00000474617 HTR2BP41595 481 aa18.61■□□□□ 0.57
CCM2-206ENST00000474617 OR2F1Q13607 317 aa18.61■□□□□ 0.57
CCM2-206ENST00000474617 C11orf87Q6NUJ2 197 aa18.61■□□□□ 0.57
CCM2-206ENST00000474617 BHLHA15Q7RTS1 189 aaPredicted RBP18.61■□□□□ 0.57
CCM2-206ENST00000474617 SLC7A5P1Q8MH63 180 aa18.61■□□□□ 0.57
CCM2-206ENST00000474617 FAM58AQ8N1B3 248 aa18.61■□□□□ 0.57
CCM2-206ENST00000474617 OR1J1Q8NGS3 322 aa18.61■□□□□ 0.57
CCM2-206ENST00000474617 HDHD3Q9BSH5 251 aaPredicted RBP18.61■□□□□ 0.57
CCM2-206ENST00000474617 FXYD6Q9H0Q3 95 aa18.61■□□□□ 0.57
CCM2-206ENST00000474617 KCNIP3Q9Y2W7 256 aa18.61■□□□□ 0.57
CCM2-206ENST00000474617 ARPC5O15511 151 aa18.6■□□□□ 0.57
CCM2-206ENST00000474617 CXCL2P19875 107 aa18.6■□□□□ 0.57
CCM2-206ENST00000474617 CA6P23280 308 aa18.6■□□□□ 0.57
CCM2-206ENST00000474617 IL32P24001 234 aa18.6■□□□□ 0.57
CCM2-206ENST00000474617 SORDQ00796 357 aa18.6■□□□□ 0.57
CCM2-206ENST00000474617 SLC38A6Q8IZM9 456 aa18.6■□□□□ 0.57
CCM2-206ENST00000474617 FAM185AQ8N0U4 392 aa18.6■□□□□ 0.57
CCM2-206ENST00000474617 BHLHE23Q8NDY6 225 aa18.6■□□□□ 0.57
CCM2-206ENST00000474617 THAP6Q8TBB0 222 aa18.6■□□□□ 0.57
CCM2-206ENST00000474617 SYT3Q9BQG1 590 aa18.6■□□□□ 0.57
CCM2-206ENST00000474617 OR2J1Q9GZK6 312 aa18.6■□□□□ 0.57
CCM2-206ENST00000474617 CHMP1AQ9HD42 196 aaPredicted RBP18.6■□□□□ 0.57
CCM2-206ENST00000474617 MEMO1Q9Y316 297 aa18.6■□□□□ 0.57
CCM2-206ENST00000474617 IGKV1D-8A0A087WSZ0 117 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms