RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 ODF4Q2M2E3 257 aa9.95□□□□□ -0.82
TRAF4-209ENST00000473421 DEFB136Q30KP8 78 aa9.95□□□□□ -0.82
TRAF4-209ENST00000473421 Q6ZSR3 168 aa9.95□□□□□ -0.82
TRAF4-209ENST00000473421 SLC25A26Q70HW3 274 aa9.95□□□□□ -0.82
TRAF4-209ENST00000473421 C16orf82Q7Z2V1 217 aa9.95□□□□□ -0.82
TRAF4-209ENST00000473421 EGFL6Q8IUX8 553 aa9.95□□□□□ -0.82
TRAF4-209ENST00000473421 ZNF679Q8IYX0 411 aa9.95□□□□□ -0.82
TRAF4-209ENST00000473421 ELMOD2Q8IZ81 293 aa9.95□□□□□ -0.82
TRAF4-209ENST00000473421 GIPC3Q8TF64 312 aa9.95□□□□□ -0.82
TRAF4-209ENST00000473421 DPF1Q92782 380 aa9.95□□□□□ -0.82
TRAF4-209ENST00000473421 MROQ9BYG7 248 aa9.95□□□□□ -0.82
TRAF4-209ENST00000473421 PKIBQ9C010 78 aa9.95□□□□□ -0.82
TRAF4-209ENST00000473421 YIPF3Q9GZM5 350 aa9.95□□□□□ -0.82
TRAF4-209ENST00000473421 ACTR3BQ9P1U1 418 aa9.95□□□□□ -0.82
TRAF4-209ENST00000473421 IKZF2Q9UKS7 526 aa9.95□□□□□ -0.82
TRAF4-209ENST00000473421 HYDINQ4G0P3 5121 aa9.95□□□□□ -0.82
TRAF4-209ENST00000473421 C3orf84H3BNL1 204 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 M0R129 80 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 DNAJC8O75937 253 aaPredicted RBP9.94□□□□□ -0.82
TRAF4-209ENST00000473421 IGHV3-7P01780 117 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 GABRR1P24046 479 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 CDK2P24941 298 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 LMO1P25800 156 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 MYCNOSP40205 109 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 OR3A4PP47883 348 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 GLIPR1P48060 266 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 ZNF91Q05481 1191 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 SLC35D3Q5M8T2 416 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 TPTE2P1Q5T6R2 138 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 KCTD18Q6PI47 426 aaPredicted RBP9.94□□□□□ -0.82
TRAF4-209ENST00000473421 DEGS2Q6QHC5 323 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 SSX6Q7RTT6 188 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 KLHL30-AS1Q8NEE0 82 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 FAM53CQ9NYF3 392 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 DNAJB9Q9UBS3 223 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 MRM2Q9UI43 246 aaKnown RBP9.94□□□□□ -0.82
TRAF4-209ENST00000473421 SCOCQ9UIL1 159 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 OR52A1Q9UKL2 312 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 DNAH7Q8WXX0 4024 aa9.94□□□□□ -0.82
TRAF4-209ENST00000473421 ARRDC5A6NEK1 342 aa9.93□□□□□ -0.82
TRAF4-209ENST00000473421 NUDT19A8MXV4 375 aa9.93□□□□□ -0.82
TRAF4-209ENST00000473421 LOC110117498-PIK3R3F6TDL0 507 aa9.93□□□□□ -0.82
TRAF4-209ENST00000473421 BUB1B-PAK6H3BSN5 160 aa9.93□□□□□ -0.82
TRAF4-209ENST00000473421 BCL3P20749 454 aa9.93□□□□□ -0.82
TRAF4-209ENST00000473421 BRS3P32247 399 aa9.93□□□□□ -0.82
TRAF4-209ENST00000473421 RIDAP52758 137 aaKnown RBP9.93□□□□□ -0.82
TRAF4-209ENST00000473421 RAB25P57735 213 aa9.93□□□□□ -0.82
TRAF4-209ENST00000473421 CBX1P83916 185 aa9.93□□□□□ -0.82
TRAF4-209ENST00000473421 IL18R1Q13478 541 aa9.93□□□□□ -0.82
TRAF4-209ENST00000473421 SNAPC1Q16533 368 aa9.93□□□□□ -0.82
TRAF4-209ENST00000473421 CAPSLQ8WWF8 208 aa9.93□□□□□ -0.82
TRAF4-209ENST00000473421 AKR1E2Q96JD6 320 aa9.93□□□□□ -0.82
TRAF4-209ENST00000473421 FAM107BQ9H098 131 aa9.93□□□□□ -0.82
TRAF4-209ENST00000473421 ING3Q9NXR8 418 aa9.93□□□□□ -0.82
TRAF4-209ENST00000473421 FAM90A18PA6NE21 464 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 FAM90A16PA6NEW6 464 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 FAM90A20PA6NIJ5 464 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 FAM90A9PA6NNJ1 464 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 FAM90A12PA8MX19 464 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 FAM90A5PA8MXJ8 464 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 LEUTXA8MZ59 168 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 SIRPB1O00241 398 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 PRKYO43930 277 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 ENTPD6O75354 484 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 ZNF254O75437 659 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 FAM90A15PP0C7V4 464 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 FAM90A13PP0C7W8 464 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 FAM90A14PP0C7W9 464 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 FAM90A24PP0C7X0 464 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 PEX2P28328 305 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 P2RX3P56373 397 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 CXCR4P61073 352 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 AESQ08117 197 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 RBM39Q14498 530 aaKnown RBP9.92□□□□□ -0.82
TRAF4-209ENST00000473421 HNF4GQ14541 408 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 HLA-DRB5Q30154 266 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 ZNF829Q3KNS6 432 aaPredicted RBP9.92□□□□□ -0.82
TRAF4-209ENST00000473421 BCL2L15Q5TBC7 163 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 ZNF322Q6U7Q0 402 aaPredicted RBP9.92□□□□□ -0.82
TRAF4-209ENST00000473421 HEPN1Q6WQI6 88 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 TRAPPC6BQ86SZ2 158 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 C5orf56Q8N8D9 126 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 OR51D1Q8NGF3 324 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 MUC7Q8TAX7 377 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 EMG1Q92979 244 aaKnown RBP9.92□□□□□ -0.82
TRAF4-209ENST00000473421 LEAP2Q969E1 77 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 MCRIP2Q9BUT9 160 aaKnown RBP9.92□□□□□ -0.82
TRAF4-209ENST00000473421 MAGIXQ9H6Y5 334 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 TVP23BQ9NYZ1 205 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 SLC7A11Q9UPY5 501 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 R4GMQ9 66 aa9.92□□□□□ -0.82
TRAF4-209ENST00000473421 STARD9Q9P2P6 4700 aa9.91□□□□□ -0.82
TRAF4-209ENST00000473421 IGKV1-9A0A0C4DH69 117 aa9.91□□□□□ -0.82
TRAF4-209ENST00000473421 IGKV1-12A0A0C4DH73 117 aa9.91□□□□□ -0.82
TRAF4-209ENST00000473421 CCL24O00175 119 aa9.91□□□□□ -0.82
TRAF4-209ENST00000473421 MGST3O14880 152 aa9.91□□□□□ -0.82
TRAF4-209ENST00000473421 SNX3O60493 162 aa9.91□□□□□ -0.82
TRAF4-209ENST00000473421 RPP14O95059 124 aaKnown RBP9.91□□□□□ -0.82
TRAF4-209ENST00000473421 IGKV1D-12P01611 117 aa9.91□□□□□ -0.82
TRAF4-209ENST00000473421 HMGN1P05114 100 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms