RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 EMG1Q92979 244 aaKnown RBP12.36□□□□□ -0.43
VTI1A-203ENST00000472892 FGGYQ96C11 551 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 RNFT2Q96EX2 444 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 ZNF714Q96N38 554 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 MBOAT4Q96T53 435 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 IMPAD1Q9NX62 359 aa12.36□□□□□ -0.43
VTI1A-203ENST00000472892 TRBV2A0A0J9YWF9 115 aa12.35□□□□□ -0.43
VTI1A-203ENST00000472892 DAPL1A0PJW8 107 aa12.35□□□□□ -0.43
VTI1A-203ENST00000472892 MEX3AA1L020 520 aaKnown RBP12.35□□□□□ -0.43
VTI1A-203ENST00000472892 H3BNX3 289 aa12.35□□□□□ -0.43
VTI1A-203ENST00000472892 SLC16A6O15403 523 aa12.35□□□□□ -0.43
VTI1A-203ENST00000472892 PSPNO60542 156 aa12.35□□□□□ -0.43
VTI1A-203ENST00000472892 IGHA1P01876 353 aa12.35□□□□□ -0.43
VTI1A-203ENST00000472892 BCL3P20749 454 aa12.35□□□□□ -0.43
VTI1A-203ENST00000472892 PRKACBP22694 351 aa12.35□□□□□ -0.43
VTI1A-203ENST00000472892 AZGP1P25311 298 aaKnown RBP12.35□□□□□ -0.43
VTI1A-203ENST00000472892 PEX2P28328 305 aa12.35□□□□□ -0.43
VTI1A-203ENST00000472892 CCR9P51686 369 aa12.35□□□□□ -0.43
VTI1A-203ENST00000472892 ZNF91Q05481 1191 aa12.35□□□□□ -0.43
VTI1A-203ENST00000472892 CCBE1Q6UXH8 406 aaPredicted RBP12.35□□□□□ -0.43
VTI1A-203ENST00000472892 FOXRED1Q96CU9 486 aaPredicted RBP12.35□□□□□ -0.43
VTI1A-203ENST00000472892 RBFOX1Q9NWB1 397 aaKnown RBP12.35□□□□□ -0.43
VTI1A-203ENST00000472892 IL36RNQ9UBH0 155 aa12.35□□□□□ -0.43
VTI1A-203ENST00000472892 FOXJ3Q9UPW0 622 aa12.35□□□□□ -0.43
VTI1A-203ENST00000472892 TCF19Q9Y242 345 aa12.35□□□□□ -0.43
VTI1A-203ENST00000472892 EXOGQ9Y2C4 368 aaKnown RBP12.35□□□□□ -0.43
VTI1A-203ENST00000472892 ORC6Q9Y5N6 252 aa12.35□□□□□ -0.43
VTI1A-203ENST00000472892 LINC00312Q9Y6C7 94 aa12.35□□□□□ -0.43
VTI1A-203ENST00000472892 TGP01266 2768 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 A6NDX4 124 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 CYB5AP00167 134 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 ERP29P30040 261 aaKnown RBP12.34□□□□□ -0.43
VTI1A-203ENST00000472892 ALDH3A2P51648 485 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 DYNLT3P51808 116 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 PDZK1IP1Q13113 114 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 EDDM3AQ14507 147 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 GRK1Q15835 563 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 FAM189A2Q15884 450 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 SSX2Q16385 188 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 SPIN3Q5JUX0 258 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 LHFPL2Q6ZUX7 228 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 Q8N2B8 174 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 ACBD7Q8N6N7 88 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 KLHDC1Q8N7A1 406 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 TPRX1Q8N7U7 411 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 OR4S1Q8NGB4 309 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 SPSB1Q96BD6 273 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 ZNF702PQ9H963 129 aa12.34□□□□□ -0.43
VTI1A-203ENST00000472892 SNTNA6NMZ2 147 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 OR4C45A6NMZ5 311 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 EI24O14681 340 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 MGST3O14880 152 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 MT-ND2P03891 347 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 ZNF20P17024 532 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 GABRR1P24046 479 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 DUSP1P28562 367 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 POU3F4P49335 361 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 ACTA2P62736 377 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 ACTG2P63267 376 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 DYNC1I2Q13409 638 aaKnown RBP12.33□□□□□ -0.44
VTI1A-203ENST00000472892 ZIK1Q3SY52 487 aaPredicted RBP12.33□□□□□ -0.44
VTI1A-203ENST00000472892 PLA1AQ53H76 456 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 MINOS1Q5TGZ0 78 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 ZNF676Q8N7Q3 588 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 RPS4Y2Q8TD47 263 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 OPALINQ96PE5 141 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 CHST6Q9GZX3 395 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 HMG20AQ9NP66 347 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 ABCB10Q9NRK6 738 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 SERTAD4Q9NUC0 356 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 GLS2Q9UI32 602 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 HHLA2Q9UM44 414 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 SESN1Q9Y6P5 492 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 MINOS1-NBL1R4GNA1 71 aa12.33□□□□□ -0.44
VTI1A-203ENST00000472892 IGHV2-26A0A0B4J1V2 119 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 IGKV1-12A0A0C4DH73 117 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 J3QLW9 94 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 KDM4BO94953 1096 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 IGKV1D-12P01611 117 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 HTR1AP08908 422 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 VSIG10L2P0DP72 767 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 CALCBP10092 127 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 ZNF19P17023 458 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 PRKACAP17612 351 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 GABRB1P18505 474 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 LMO1P25800 156 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 OR3A1P47881 315 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 ZFP1Q6P2D0 407 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 C11orf44Q8N8P7 122 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 OR51A4Q8NGJ6 313 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 OR10AC1Q8NH08 325 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 LGALS12Q96DT0 336 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 PELI1Q96FA3 418 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 NKX3-1Q99801 234 aaPredicted RBP12.32□□□□□ -0.44
VTI1A-203ENST00000472892 TMEM133Q9H2Q1 129 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 AASSQ9UDR5 926 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 PITPNC1Q9UKF7 332 aa12.32□□□□□ -0.44
VTI1A-203ENST00000472892 UBE2J1Q9Y385 318 aaPredicted RBP12.32□□□□□ -0.44
VTI1A-203ENST00000472892 SH2D1BO14796 132 aa12.31□□□□□ -0.44
VTI1A-203ENST00000472892 ALX3O95076 343 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 299.6 ms