RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 TNFRSF14Q92956 283 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 YPEL4Q96NS1 127 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 ASF1BQ9NVP2 202 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 DNAJC27Q9NZQ0 273 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 BAZ2AQ9UIF9 1905 aaKnown RBP2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 NID2Q14112 1375 aa2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 NDUFS8O00217 210 aa2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 MLNP12872 115 aa2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 HRES1P13985 223 aa2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 DNASE1L1P49184 302 aa2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 KLF3P57682 345 aaPredicted RBP2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 XIAPP98170 497 aa2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 BNIP2Q12982 314 aa2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 ZNF660Q6AZW8 331 aaPredicted RBP2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 FAHD1Q6P587 224 aa2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 GAPTQ8N292 157 aa2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 CLHC1Q8NHS4 586 aa2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 LRRC20Q8TCA0 184 aa2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 LGALS14Q8TCE9 139 aa2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 FXYD5Q96DB9 178 aa2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 HINT2Q9BX68 163 aa2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 TRAPPC1Q9Y5R8 145 aa2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 ZNF706Q9Y5V0 76 aaPredicted RBP2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 R4GN34 69 aa2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 KIAA1671Q9BY89 1806 aa2.37□□□□□ -2.03
PRPF40A-208ENST00000472760 RAB19A4D1S5 217 aa2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 CD8AP01732 235 aa2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 PTHLHP12272 177 aa2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 IL12BP29460 328 aa2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 ENDOGQ14249 297 aaKnown RBP2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 GPR176Q14439 515 aa2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 GUSBP1Q15486 140 aa2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 CEACAM16Q2WEN9 425 aa2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 ACTL10Q5JWF8 245 aa2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 CLEC18BQ6UXF7 455 aa2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 AMN1Q8IY45 258 aa2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 OR6K3Q8NGY3 331 aa2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 OR8S1Q8NH09 359 aa2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 BLNKQ8WV28 456 aa2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 OTUB2Q96DC9 234 aa2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 NXF2Q9GZY0 626 aaKnown RBP2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 DIABLOQ9NR28 239 aa2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 ZNF230Q9UIE0 474 aaPredicted RBP2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 SETD1AO15047 1707 aaKnown RBP2.36□□□□□ -2.03
PRPF40A-208ENST00000472760 BAZ1BQ9UIG0 1483 aaKnown RBP2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 MGAT4DA6NG13 374 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 CD300LBA8K4G0 201 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 C15orf65H3BRN8 121 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 K7EPK0 472 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 K7ERS5 55 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 ENTPD6O75354 484 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 ZMPSTE24O75844 475 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 S100A9P06702 114 aaKnown RBP2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 GIMD1P0DJR0 217 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 SCGB1C2P0DMR2 95 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 PRPS1L1P21108 318 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 TMEM241Q24JQ0 296 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 ACTBL2Q562R1 376 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 PYDC2Q56P42 97 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 AMMECR1LQ6DCA0 310 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 DRAXINQ8NBI3 349 aaPredicted RBP2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 OR8G5Q8NG78 346 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 CMTM2Q8TAZ6 248 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 SCGB1C1Q8TD33 95 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 C2orf15Q8WU43 125 aaKnown RBP2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 ZNF75CPQ92670 426 aaPredicted RBP2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 LRRC39Q96DD0 335 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 ZNF396Q96N95 335 aaPredicted RBP2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 SIKE1Q9BRV8 207 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 ANAPC13Q9BS18 74 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 ABCG5Q9H222 651 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 ZNF229Q9UJW7 825 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 SLC22A14Q9Y267 594 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 ICOSQ9Y6W8 199 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 TRIP11Q15643 1979 aa2.35□□□□□ -2.03
PRPF40A-208ENST00000472760 RBFOX3A6NFN3 312 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 LEUTXA8MZ59 168 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 D6RAR5 112 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 H3BQ85 93 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 PSMD11O00231 422 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 GYG2O15488 501 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 TNNC1P63316 161 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 C2orf80Q0P641 193 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 TNXAQ16473 311 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 Q499Y3 187 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 PDZD11Q5EBL8 140 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 FAM19A1Q7Z5A9 133 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 GALNT10Q86SR1 603 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 ST13P4Q8IZP2 240 aaPredicted RBP2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 TRIML2Q8N7C3 387 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 OR2K2Q8NGT1 345 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 ACTL9Q8TC94 416 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 NELFBQ8WX92 580 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 MSANTD3Q96H12 275 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 FMC1Q96HJ9 113 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 PRRG3Q9BZD7 231 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 DSN1Q9H410 356 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 RMND1Q9NWS8 449 aa2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 C14orf166Q9Y224 244 aaKnown RBP2.34□□□□□ -2.03
PRPF40A-208ENST00000472760 RBMX2Q9Y388 322 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms