RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 MAP2K4P45985 399 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 CAPZA1P52907 286 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 FGF12P61328 243 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 TRAM1Q15629 374 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 ACSM3Q53FZ2 586 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 ARMCX4Q5H9R4 360 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 DDI2Q5TDH0 399 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 LIPKQ5VXJ0 399 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 ELP2Q6IA86 826 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 ASCL4Q6XD76 172 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 ZNF367Q7RTV3 350 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 CDH26Q8IXH8 852 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 SVOPQ8N4V2 548 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 TNFAIP8L1Q8WVP5 186 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 H1FXQ92522 213 aaKnown RBP12.63□□□□□ -0.39
SDC3-203ENST00000471567 ORAI1Q96D31 301 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 ACOT13Q9NPJ3 140 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 LRRC42Q9Y546 428 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 KPTNQ9Y664 436 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 TRAV8-7A0A075B6U6 113 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 A0A1W2PPK0 400 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 K7N7A8 449 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 SC5DO75845 299 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 HAND1O96004 215 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 TK1P04183 234 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 SFTPBP07988 381 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 EPHA1P21709 976 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 PSMA1P25786 263 aaKnown RBP12.62□□□□□ -0.39
SDC3-203ENST00000471567 PTGFRP43088 359 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 MTNR1BP49286 362 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 CEBPDP49716 269 aaPredicted RBP12.62□□□□□ -0.39
SDC3-203ENST00000471567 COL10A1Q03692 680 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 METTL11BQ5VVY1 283 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 CMTM4Q8IZR5 234 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 KIR3DL3Q8N743 410 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 OR5D13Q8NGL4 314 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 SNX22Q96L94 193 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 WDFY2Q96P53 400 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 TMED9Q9BVK6 235 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 SIRPDQ9H106 197 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 NOX4Q9NPH5 578 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 NUP50Q9UKX7 468 aa12.62□□□□□ -0.39
SDC3-203ENST00000471567 MEGF11A6BM72 1044 aa12.61□□□□□ -0.39
SDC3-203ENST00000471567 SH2D1BO14796 132 aa12.61□□□□□ -0.39
SDC3-203ENST00000471567 ZNF737O75373 536 aa12.61□□□□□ -0.39
SDC3-203ENST00000471567 TOX4O94842 621 aa12.61□□□□□ -0.39
SDC3-203ENST00000471567 MMP9P14780 707 aa12.61□□□□□ -0.39
SDC3-203ENST00000471567 ARF6P62330 175 aa12.61□□□□□ -0.39
SDC3-203ENST00000471567 EMX1Q04741 257 aaPredicted RBP12.61□□□□□ -0.39
SDC3-203ENST00000471567 KLF17Q5JT82 389 aaPredicted RBP12.61□□□□□ -0.39
SDC3-203ENST00000471567 C1orf122Q6ZSJ8 110 aa12.61□□□□□ -0.39
SDC3-203ENST00000471567 PHC2Q8IXK0 858 aa12.61□□□□□ -0.39
SDC3-203ENST00000471567 ASCC1Q8N9N2 400 aaKnown RBP12.61□□□□□ -0.39
SDC3-203ENST00000471567 Q8NFD4 153 aa12.61□□□□□ -0.39
SDC3-203ENST00000471567 TBC1D15Q8TC07 691 aa12.61□□□□□ -0.39
SDC3-203ENST00000471567 PHYHIPQ92561 330 aa12.61□□□□□ -0.39
SDC3-203ENST00000471567 IL36GQ9NZH8 169 aa12.61□□□□□ -0.39
SDC3-203ENST00000471567 IL36RNQ9UBH0 155 aa12.61□□□□□ -0.39
SDC3-203ENST00000471567 FPR2P25090 351 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 LMO1P25800 156 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 OR3A4PP47883 348 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 BPIFB3P59826 476 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 PDCD1Q15116 288 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 RSU1Q15404 277 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 CEACAM19Q7Z692 300 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 SPARTQ8N0X7 666 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 OR8H2Q8N162 312 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 NKAIN3Q8N8D7 197 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 PPP1R35Q8TAP8 253 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 TBX15Q96SF7 602 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 S100A13Q99584 98 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 PCGF1Q9BSM1 259 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 FAM192AQ9GZU8 254 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 METTL9Q9H1A3 318 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 ELL3Q9HB65 397 aaPredicted RBP12.6□□□□□ -0.39
SDC3-203ENST00000471567 TCF7L1Q9HCS4 588 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 EXOSC4Q9NPD3 245 aaKnown RBP12.6□□□□□ -0.39
SDC3-203ENST00000471567 PCDHB16Q9NRJ7 776 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 GSTK1Q9Y2Q3 226 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 SF3B6Q9Y3B4 125 aaKnown RBP12.6□□□□□ -0.39
SDC3-203ENST00000471567 MXRA5Q9NR99 2828 aa12.6□□□□□ -0.39
SDC3-203ENST00000471567 A0A0A6YYJ9 748 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 A0A1W2PPH5 198 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 A0A1W2PQ09 198 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 TMEM82A0PJX8 343 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 MAGEA13PA6NCF6 341 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 M0R1W7 72 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 ZNF780AO75290 641 aaPredicted RBP12.59□□□□□ -0.39
SDC3-203ENST00000471567 MAS1P04201 325 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 UCHL1P09936 223 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 CALCBP10092 127 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 DUSP1P28562 367 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 GABRA5P31644 462 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 GP2P55259 537 aaKnown RBP12.59□□□□□ -0.39
SDC3-203ENST00000471567 RPL31P62899 125 aaKnown RBP12.59□□□□□ -0.39
SDC3-203ENST00000471567 BLMHQ13867 455 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 GPR176Q14439 515 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 INSL4Q14641 139 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 HSD17B12Q53GQ0 312 aa12.59□□□□□ -0.39
SDC3-203ENST00000471567 UBE2UQ5VVX9 321 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms