RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 ZNF506Q5JVG8 444 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 C1orf53Q5VUE5 145 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 FAM57BQ71RH2 274 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 FBXL14Q8N1E6 418 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 OR5T1Q8NG75 326 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 FLVCR1-AS1Q8TAF5 88 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 TMEM171Q8WVE6 324 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 C11orf40Q8WZ69 217 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 LIN37Q96GY3 246 aaPredicted RBP8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 BOD1Q96IK1 185 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 SYT3Q9BQG1 590 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 ELOVL1Q9BW60 279 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 ZNF665Q9H7R5 613 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 FBRSQ9HAH7 460 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 FAM60AQ9NP50 221 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 FUT9Q9Y231 359 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 A0A1B0GU03 582 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 CEBPZOSA8MTT3 80 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 H3BP45 60 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 OPN1MWP04001 364 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 OPN1MW2P0DN77 364 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 OPN1MW3P0DN78 364 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 IL12BP29460 328 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 WNT5AP41221 380 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 CSNK1A1P48729 337 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 DYNLT3P51808 116 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 TLE4Q04727 773 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 TRA2AQ13595 282 aaKnown RBP eCLIP8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 OR5I1Q13606 314 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 HNF4GQ14541 408 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 IL13RA2Q14627 380 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 RNF133Q8WVZ7 376 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 DYRK2Q92630 601 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 HOXB13Q92826 284 aaPredicted RBP8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 PIGTQ969N2 578 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 CCNL2Q96S94 520 aaPredicted RBP8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 PCNX3Q9H6A9 2034 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 CALHM2Q9HA72 323 aa8.34□□□□□ -1.07
NHLRC3-203ENST00000470258 ANOS1P23352 680 aa8.34□□□□□ -1.08
NHLRC3-203ENST00000470258 HNRNPKP61978 463 aaKnown RBP eCLIP8.34□□□□□ -1.08
NHLRC3-203ENST00000470258 TMEM187Q14656 261 aa8.34□□□□□ -1.08
NHLRC3-203ENST00000470258 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.34□□□□□ -1.08
NHLRC3-203ENST00000470258 OOSP2Q86WS3 158 aa8.34□□□□□ -1.08
NHLRC3-203ENST00000470258 WDFY1Q8IWB7 410 aa8.34□□□□□ -1.08
NHLRC3-203ENST00000470258 C20orf196Q8IYI0 205 aa8.34□□□□□ -1.08
NHLRC3-203ENST00000470258 BAHD1Q8TBE0 780 aaPredicted RBP8.34□□□□□ -1.08
NHLRC3-203ENST00000470258 RNASEH2CQ8TDP1 164 aaKnown RBP8.34□□□□□ -1.08
NHLRC3-203ENST00000470258 DIRC2Q96SL1 478 aa8.34□□□□□ -1.08
NHLRC3-203ENST00000470258 ZBP1Q9H171 429 aa8.34□□□□□ -1.08
NHLRC3-203ENST00000470258 LIME1Q9H400 295 aa8.34□□□□□ -1.08
NHLRC3-203ENST00000470258 FKBP11Q9NYL4 201 aa8.34□□□□□ -1.08
NHLRC3-203ENST00000470258 ANAPC10Q9UM13 185 aa8.34□□□□□ -1.08
NHLRC3-203ENST00000470258 RP1P56715 2156 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 B4DEV8 164 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 PLPP3O14495 311 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 LILRB3O75022 631 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 CD33P20138 364 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 HSD17B7P56937 341 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 PRSS8Q16651 343 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 CST9LP1Q5W188 147 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 RTL6Q6ICC9 239 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 NUP54Q7Z3B4 507 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 MMABQ96EY8 250 aaPredicted RBP8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 V9GYS6 101 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 SPEGQ15772 3267 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 PHF3Q92576 2039 aaKnown RBP8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 SZT2Q5T011 3432 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 NKX2-6A6NCS4 301 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 C2orf72A6NCS6 295 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 OPN1LWP04000 364 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 FCGR2AP12318 317 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 EPHA1P21709 976 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 CDAP32320 146 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 NKX2-1P43699 371 aaPredicted RBP8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 TFPI2P48307 235 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 ZNF121P58317 390 aaPredicted RBP8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 ZNF154Q13106 437 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 KISS1Q15726 138 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 CARD17Q5XLA6 110 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 ZNF774Q6NX45 483 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 LIAT1Q6ZQX7 453 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 OR8B12Q8NGG6 310 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 RBMXL1Q96E39 390 aaKnown RBP8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 SDSLQ96GA7 329 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 RCC1LQ96I51 464 aaKnown RBP8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 OR5B12Q96R08 314 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 GPHA2Q96T91 129 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 NUDT16L1Q9BRJ7 211 aaKnown RBP8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 PCGF1Q9BSM1 259 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 NKX2-4Q9H2Z4 354 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 SLC2A9Q9NRM0 540 aa8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 THAP10Q9P2Z0 257 aaPredicted RBP8.33□□□□□ -1.08
NHLRC3-203ENST00000470258 IRF2P14316 349 aa8.32□□□□□ -1.08
NHLRC3-203ENST00000470258 ZNF43P17038 809 aa8.32□□□□□ -1.08
NHLRC3-203ENST00000470258 RPS21P63220 83 aaKnown RBP8.32□□□□□ -1.08
NHLRC3-203ENST00000470258 FNDC7Q5VTL7 733 aa8.32□□□□□ -1.08
NHLRC3-203ENST00000470258 C16orf82Q7Z2V1 217 aa8.32□□□□□ -1.08
NHLRC3-203ENST00000470258 SLC38A9Q8NBW4 561 aa8.32□□□□□ -1.08
NHLRC3-203ENST00000470258 ZNF319Q9P2F9 582 aa8.32□□□□□ -1.08
NHLRC3-203ENST00000470258 ANXA10Q9UJ72 324 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms