RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 TRGC1P0CF51 173 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 FAM157CP0CG43 387 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 GAGE12FP0CL80 117 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 GAGE12GP0CL81 117 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 GAGE12IP0CL82 117 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 ERGP11308 486 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 HOXB6P17509 224 aaKnown RBP4.44□□□□□ -1.7
COL3A1-205ENST00000470167 MAOAP21397 527 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 EVI2AP22794 236 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 BTCP35070 178 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 PNPLA4P41247 253 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 TSFMP43897 325 aaKnown RBP4.44□□□□□ -1.7
COL3A1-205ENST00000470167 BDKRB1P46663 353 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 SLC6A9P48067 706 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 CX3CR1P49238 355 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 SELENOPP49908 381 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 UCP3P55916 312 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 CLDN15P56746 228 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 NXPH1P58417 271 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 RPS23P62266 143 aaKnown RBP4.44□□□□□ -1.7
COL3A1-205ENST00000470167 HIST1H3AP68431 136 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 SRSF3P84103 164 aaKnown RBP4.44□□□□□ -1.7
COL3A1-205ENST00000470167 PSG4Q00888 419 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 PIGFQ07326 219 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 GAGE4Q13068 117 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 CTBP1Q13363 440 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 SIX1Q15475 284 aaPredicted RBP4.44□□□□□ -1.7
COL3A1-205ENST00000470167 ELAVL1Q15717 326 aaKnown RBP4.44□□□□□ -1.7
COL3A1-205ENST00000470167 SSX1Q16384 188 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 SYPL1Q16563 259 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 ST3GAL2Q16842 350 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 DCAF4L1Q3SXM0 396 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 KHDC1LQ5JSQ8 128 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 OLFML2AQ68BL7 652 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 OPN5Q6U736 354 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 EPGNQ6UW88 154 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 DHRS13Q6UX07 377 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 PLXDC2Q6UX71 529 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 Q6ZSR6 202 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 CLEC20AQ6ZU45 233 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 MAVSQ7Z434 540 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 DEFB132Q7Z7B7 95 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 GLCCI1Q86VQ1 547 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 FGFRL1Q8N441 504 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 KCNRGQ8N5I3 272 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 ZFP41Q8N8Y5 198 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 RELL2Q8NC24 303 aaPredicted RBP4.44□□□□□ -1.7
COL3A1-205ENST00000470167 OR11G2Q8NGC1 345 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 OR4B1Q8NGF8 309 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 OR6K2Q8NGY2 324 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 OR2T27Q8NH04 317 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 SOCS4Q8WXH5 440 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 BAALCQ8WXS3 180 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 APH1AQ96BI3 265 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 C10orf35Q96D05 121 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 RAB39BQ96DA2 213 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 MBD6Q96DN6 1003 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 MS4A10Q96PG2 267 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 YPEL2Q96QA6 119 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 NKX3-1Q99801 234 aaPredicted RBP4.44□□□□□ -1.7
COL3A1-205ENST00000470167 DERL1Q9BUN8 251 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 MRIQ9BWK5 157 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 KRTAP4-8Q9BYQ9 185 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 TMEM39BQ9GZU3 492 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 OR51I1Q9H343 314 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 OR51I2Q9H344 312 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 POPDC3Q9HBV1 291 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 HEYLQ9NQ87 328 aaPredicted RBP4.44□□□□□ -1.7
COL3A1-205ENST00000470167 SPANXB1Q9NS25 103 aaPredicted RBP4.44□□□□□ -1.7
COL3A1-205ENST00000470167 BABAM1Q9NWV8 329 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 DNAJC27Q9NZQ0 273 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 EXO1Q9UQ84 846 aaKnown RBP4.44□□□□□ -1.7
COL3A1-205ENST00000470167 SH2B3Q9UQQ2 575 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 ORC6Q9Y5N6 252 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 KDM3BQ7LBC6 1761 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 MYH10P35580 1976 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 TRAV36DV7A0A075B6V5 113 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 LOC102724200A0A096LPH7 203 aaPredicted RBP4.43□□□□□ -1.7
COL3A1-205ENST00000470167 A0A0B4J2A0 478 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 A0A0B4J2E0 115 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 A0A1B0GX12 115 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 IGLC7A0M8Q6 106 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 MBD3L4A6NDZ8 208 aaPredicted RBP4.43□□□□□ -1.7
COL3A1-205ENST00000470167 MBD3L3A6NE82 208 aaPredicted RBP4.43□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF503-AS2A6NEH8 195 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 MBD3L5A6NJ08 208 aaPredicted RBP4.43□□□□□ -1.7
COL3A1-205ENST00000470167 CGB1A6NKQ9 187 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 NPIPB5A8MRT5 1133 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 FAM166BA8MTA8 275 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 SNRPGP15A8MWD9 76 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 NPIPB6E9PJ23 425 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF670-ZNF695F2Z2N8 137 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 F5H5K5 113 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 BCL2L11O43521 198 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 ALOX12BO75342 701 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 HSBP1O75506 76 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 CLDN1O95832 211 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 EML2O95834 649 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 C1RP00736 705 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms