RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 DUSP1P28562 367 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 EIF2B2P49770 351 aaKnown RBP15.42■□□□□ 0.06
SMC4-211ENST00000469858 CD83Q01151 205 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 TMEM108Q6UXF1 575 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 FAM58AQ8N1B3 248 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 PIAS4Q8N2W9 510 aaPredicted RBP15.42■□□□□ 0.06
SMC4-211ENST00000469858 POM121Q96HA1 1249 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 ST6GAL2Q96JF0 529 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 ZNF442Q9H7R0 627 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 POLDIP2Q9Y2S7 368 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 A0A1B0GUH1 482 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 IKZF1Q13422 519 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 ACTBL2Q562R1 376 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 OR13C8Q8NGS7 320 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 OR5H2Q8NGV7 314 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 OR13G1Q8NGZ3 307 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 SYT3Q9BQG1 590 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 MED28Q9H204 178 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 CXXC4Q9H2H0 198 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 SLC2A8Q9NY64 477 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 ZNF221Q9UK13 617 aa15.42■□□□□ 0.06
SMC4-211ENST00000469858 FAM221AA4D161 298 aa15.41■□□□□ 0.06
SMC4-211ENST00000469858 ERVH48-1M5A8F1 160 aa15.41■□□□□ 0.06
SMC4-211ENST00000469858 HPXP02790 462 aa15.41■□□□□ 0.06
SMC4-211ENST00000469858 THBDP07204 575 aa15.41■□□□□ 0.06
SMC4-211ENST00000469858 ZNF250P15622 560 aa15.41■□□□□ 0.06
SMC4-211ENST00000469858 KLF3P57682 345 aaPredicted RBP15.41■□□□□ 0.06
SMC4-211ENST00000469858 MPV17LQ2QL34 196 aa15.41■□□□□ 0.06
SMC4-211ENST00000469858 PCSK4Q6UW60 755 aa15.41■□□□□ 0.06
SMC4-211ENST00000469858 TMEM171Q8WVE6 324 aa15.41■□□□□ 0.06
SMC4-211ENST00000469858 SLC25A21Q9BQT8 299 aaPredicted RBP15.41■□□□□ 0.06
SMC4-211ENST00000469858 SEC22CQ9BRL7 303 aa15.41■□□□□ 0.06
SMC4-211ENST00000469858 PLK3Q9H4B4 646 aa15.41■□□□□ 0.06
SMC4-211ENST00000469858 RANGRFQ9HD47 186 aaPredicted RBP15.41■□□□□ 0.06
SMC4-211ENST00000469858 COL6A6A6NMZ7 2263 aa15.41■□□□□ 0.06
SMC4-211ENST00000469858 ATXN7O15265 892 aaPredicted RBP15.4■□□□□ 0.06
SMC4-211ENST00000469858 OR3A3P47888 321 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 MECP2P51608 486 aaKnown RBP15.4■□□□□ 0.06
SMC4-211ENST00000469858 TAS2R46P59540 309 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 GMFBP60983 142 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 MAB21L1Q13394 359 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 ZMYND11Q15326 602 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 VAX1Q5SQQ9 334 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 METTL11BQ5VVY1 283 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 GLDNQ6ZMI3 551 aaPredicted RBP15.4■□□□□ 0.06
SMC4-211ENST00000469858 IGKV1D-8A0A087WSZ0 117 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 TMEM82A0PJX8 343 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 A6NLC8 198 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 FAM90A27PA6NNH2 459 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 HSPB6O14558 160 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 FCGR3AP08637 254 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 PTAFRP25105 342 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 ASCL1P50553 236 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 RPS23P62266 143 aaKnown RBP15.4■□□□□ 0.06
SMC4-211ENST00000469858 FCN2Q15485 313 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 CHRFAM7AQ494W8 412 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 PRAMEF6Q5VXH4 476 aa15.4■□□□□ 0.06
SMC4-211ENST00000469858 GTF3AQ92664 365 aaKnown RBP15.4■□□□□ 0.06
SMC4-211ENST00000469858 FYTTD1Q96QD9 318 aaKnown RBP15.4■□□□□ 0.06
SMC4-211ENST00000469858 CHD3Q12873 2000 aaKnown RBP15.39■□□□□ 0.05
SMC4-211ENST00000469858 PRSS44E7EML9 344 aa15.39■□□□□ 0.05
SMC4-211ENST00000469858 ABCD4O14678 606 aa15.39■□□□□ 0.05
SMC4-211ENST00000469858 SSNA1O43805 119 aa15.39■□□□□ 0.05
SMC4-211ENST00000469858 IGHV3-13P01766 116 aa15.39■□□□□ 0.05
SMC4-211ENST00000469858 PGA5P0DJD9 388 aa15.39■□□□□ 0.05
SMC4-211ENST00000469858 VSIG10L2P0DP72 767 aa15.39■□□□□ 0.05
SMC4-211ENST00000469858 DTYMKP23919 212 aa15.39■□□□□ 0.05
SMC4-211ENST00000469858 TMED4Q7Z7H5 227 aa15.39■□□□□ 0.05
SMC4-211ENST00000469858 LINC00596Q86U02 117 aa15.39■□□□□ 0.05
SMC4-211ENST00000469858 Q8IYB0 196 aa15.39■□□□□ 0.05
SMC4-211ENST00000469858 SPERTQ8NA61 448 aa15.39■□□□□ 0.05
SMC4-211ENST00000469858 OR2Z1Q8NG97 314 aa15.39■□□□□ 0.05
SMC4-211ENST00000469858 OR5AP2Q8NGF4 316 aa15.39■□□□□ 0.05
SMC4-211ENST00000469858 DMRTB1Q96MA1 342 aa15.39■□□□□ 0.05
SMC4-211ENST00000469858 WFIKKN1Q96NZ8 548 aa15.39■□□□□ 0.05
SMC4-211ENST00000469858 C12orf4Q9NQ89 552 aa15.39■□□□□ 0.05
SMC4-211ENST00000469858 EHFQ9NZC4 300 aa15.39■□□□□ 0.05
SMC4-211ENST00000469858 RCC2Q9P258 522 aaKnown RBP15.39■□□□□ 0.05
SMC4-211ENST00000469858 TPRP12270 2363 aaKnown RBP15.38■□□□□ 0.05
SMC4-211ENST00000469858 DPRXA6NFQ7 191 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 SDCBPO00560 298 aaPredicted RBP15.38■□□□□ 0.05
SMC4-211ENST00000469858 CHRNB4P30926 498 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 TSPAN5P62079 268 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 BSPH1Q075Z2 132 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 IL13RA2Q14627 380 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 ZNF826PQ6ZT77 177 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 SSX8Q7RTT4 187 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 SLC36A1Q7Z2H8 476 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 ARRDC1Q8N5I2 433 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 NEK7Q8TDX7 302 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 MRGPRFQ96AM1 343 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 CHST6Q9GZX3 395 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 RHOFQ9HBH0 211 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 GPN1Q9HCN4 374 aaPredicted RBP15.38■□□□□ 0.05
SMC4-211ENST00000469858 UFSP2Q9NUQ7 469 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 COQ3Q9NZJ6 369 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 ITPR1Q14643 2758 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 OR2AT4A6NND4 320 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 NXPH2O95156 264 aa15.38■□□□□ 0.05
SMC4-211ENST00000469858 IL5P05113 134 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms