RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 IL21Q9HBE4 155 aa7.9□□□□□ -1.15
SMARCE1-207ENST00000469334 PRSS50Q9UI38 385 aa7.9□□□□□ -1.15
SMARCE1-207ENST00000469334 MRPS2Q9Y399 296 aaKnown RBP7.9□□□□□ -1.15
SMARCE1-207ENST00000469334 IGSF23A1L1A6 192 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 F6UZH7 168 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 LMX1BO60663 402 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 NDUFB8O95169 186 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 IGKV1D-16P01601 117 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 HPNP05981 417 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 DBHP09172 617 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 ESDP10768 282 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 TFPI2P48307 235 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 DCAF7P61962 342 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 MLF2Q15773 248 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 ADIRFQ15847 76 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 ZNF787Q6DD87 383 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 ERN2Q76MJ5 926 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 RTN4RL2Q86UN3 420 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 OR10S1Q8NGN2 331 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 OR14C36Q8NHC7 312 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 ZNF519Q8TB69 540 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 SPIN2AQ99865 258 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 SPIN2BQ9BPZ2 258 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 WIPI2Q9Y4P8 454 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 ATG2AQ2TAZ0 1938 aa7.89□□□□□ -1.15
SMARCE1-207ENST00000469334 IGHV2-70DA0A0C4DH43 119 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 FAM221AA4D161 298 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 FOXI3A8MTJ6 420 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 ZNF878C9JN71 531 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 LATO43561 262 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 FGF17O60258 216 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 KBTBD11O94819 623 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 IGHMP01871 453 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 PRNPP04156 253 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 ZNF20P17024 532 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 BMP5P22003 454 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 PIGPP57054 158 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 RPL27P61353 136 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 TMEM52BQ4KMG9 183 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 ABCA11PQ4W5N1 156 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 TIPARPQ7Z3E1 657 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 MARCH3Q86UD3 253 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 OR52R1Q8NGF1 315 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 OR52M1Q8NGK5 317 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 OR2V1Q8NHB1 315 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 CMTM2Q8TAZ6 248 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 ATP5SQ99766 215 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 SMIM7Q9BQ49 75 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 VN1R1Q9GZP7 353 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 UQCR10Q9UDW1 63 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 COX11Q9Y6N1 276 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 LOC105371242A0A075B767 164 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 LINC01553A4QN01 128 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 OR6C6A6NF89 314 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 FAM24AA6NFZ4 105 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 TMEM250H0YL14 139 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 SLC16A7O60669 478 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 DDAH2O95865 285 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 EFEMP2O95967 443 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 CD55P08174 381 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 CT62P0C5K7 136 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 ZNF728P0DKX0 622 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 FOSL2P15408 326 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 WNT5AP41221 380 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 ID2Q02363 134 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 NFATC4Q14934 902 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 RNF151Q2KHN1 245 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 MPV17LQ2QL34 196 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 MAJINQ3KP22 176 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 POM121L1PQ3SYA9 428 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 CBLN3Q6UW01 205 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 LYZL2Q7Z4W2 148 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 LYG1Q8N1E2 194 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 D2HGDHQ8N465 521 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 TMEM252Q8N6L7 170 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 ADAMTS18Q8TE60 1221 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 SOCS4Q8WXH5 440 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 DAZLQ92904 295 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 ARRDC3Q96B67 414 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 TM4SF19Q96DZ7 209 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 ADAT3Q96EY9 351 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 PARD6GQ9BYG4 376 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 CSTL1Q9H114 145 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 MOB1AQ9H8S9 216 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 PTRH2Q9Y3E5 179 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 CACNA1CQ13936 2221 aa7.88□□□□□ -1.15
SMARCE1-207ENST00000469334 TMEM131Q92545 1883 aa7.87□□□□□ -1.15
SMARCE1-207ENST00000469334 TRAV30A0A087WSZ9 112 aa7.87□□□□□ -1.15
SMARCE1-207ENST00000469334 ZFP92A6NM28 416 aa7.87□□□□□ -1.15
SMARCE1-207ENST00000469334 TMEM238C9JI98 176 aa7.87□□□□□ -1.15
SMARCE1-207ENST00000469334 HOXA2O43364 376 aa7.87□□□□□ -1.15
SMARCE1-207ENST00000469334 FOXS1O43638 330 aa7.87□□□□□ -1.15
SMARCE1-207ENST00000469334 ZNF823P16415 610 aa7.87□□□□□ -1.15
SMARCE1-207ENST00000469334 PEBP1P30086 187 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-207ENST00000469334 RPL15P61313 204 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-207ENST00000469334 RPL19P84098 196 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-207ENST00000469334 EGR4Q05215 589 aa7.87□□□□□ -1.15
SMARCE1-207ENST00000469334 PRSS8Q16651 343 aa7.87□□□□□ -1.15
SMARCE1-207ENST00000469334 DNM1P34Q6PK57 102 aa7.87□□□□□ -1.15
SMARCE1-207ENST00000469334 CCDC71LQ8N9Z2 235 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms