RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SIRT3Q9NTG7 399 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF586Q9NXT0 402 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 OR6C3Q9NZP0 311 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 RBPJLQ9UBG7 517 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 HSF4Q9ULV5 492 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 LCTP09848 1927 aa4.26□□□□□ -1.73
SF3B1-207ENST00000468925 MYO10Q9HD67 2058 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 NSG1A0A0A6YYJ2 146 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 A0A0U1RQK1 487 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 LOC102723971A0A1B0GUV8 181 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 SMIM35A0A1B0GVV1 85 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 DUXBA0A1W2PPF3 345 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 A0A1W2PPK0 400 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF320A2RRD8 509 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 MSGN1A6NI15 193 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 OR4C45A6NMZ5 311 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF814B7Z6K7 855 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 PRAMEF26H0Y7S4 382 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 J3QR89 54 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 K7ESM1 405 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 M0QYG6 137 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 M0QZQ0 153 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 ST8SIA3O43173 380 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF217O75362 1048 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 PITX3O75364 302 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 OR6A2O95222 327 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 SLC2A10O95528 541 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 ETHE1O95571 254 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 IGHEP01854 428 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 C1QCP02747 245 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 OR10J4P0C629 311 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 IRF1P10914 325 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 SELEP16581 610 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF708P17019 499 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 ANOS1P23352 680 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 UCP1P25874 307 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 DUSP1P28562 367 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 CEACAM8P31997 349 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-207ENST00000468925 BCL6P41182 706 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 FLT3LGP49771 235 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 SGSHP51688 502 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 FGF8P55075 233 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-207ENST00000468925 POLR2LP62875 67 aaKnown RBP4.25□□□□□ -1.73
SF3B1-207ENST00000468925 CSNK1G2P78368 415 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 BTG2P78543 158 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 HTD2P86397 168 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 PAX2Q02962 417 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF92Q03936 586 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 MGAT2Q10469 447 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 MRPL49Q13405 166 aaKnown RBP4.25□□□□□ -1.73
SF3B1-207ENST00000468925 ICAM4Q14773 271 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 DUSP5Q16690 384 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 IAH1Q2TAA2 248 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-207ENST00000468925 PLPPR5Q32ZL2 321 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF260Q3ZCT1 412 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 SP5Q6BEB4 398 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-207ENST00000468925 MRPL54Q6P161 138 aaKnown RBP4.25□□□□□ -1.73
SF3B1-207ENST00000468925 C19orf35Q6ZS72 473 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 CYP2G1PQ6ZSU1 146 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 TMPPEQ6ZT21 453 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 TPRG1Q6ZUI0 275 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 GTF2H5Q6ZYL4 71 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 TRAPPC6BQ86SZ2 158 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 AMZ2Q86W34 360 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 SLC39A11Q8N1S5 342 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 PNPLA1Q8N8W4 532 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 OR5AU1Q8NGC0 362 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 OR51G1Q8NGK1 321 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 OR2G3Q8NGZ4 309 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 OR4K13Q8NH42 304 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 CLDND2Q8NHS1 167 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 FAM213BQ8TBF2 198 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 OVCA2Q8WZ82 227 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 PSMF1Q92530 271 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 DPF1Q92782 380 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 RAB8BQ92930 207 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 DVL3Q92997 716 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-207ENST00000468925 TOMM40LQ969M1 308 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 SPSB1Q96BD6 273 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 PINX1Q96BK5 328 aaKnown RBP4.25□□□□□ -1.73
SF3B1-207ENST00000468925 GPR146Q96CH1 333 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 REEP6Q96HR9 211 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 CAPNS2Q96L46 248 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 TMEM56Q96MV1 263 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 OR7D2Q96RA2 312 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 GPX7Q96SL4 187 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-207ENST00000468925 KXD1Q9BQD3 176 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 TXNDC17Q9BRA2 123 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 ELOVL1Q9BW60 279 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 NUDT9Q9BW91 350 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 SLC25A18Q9H1K4 315 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 CXCL16Q9H2A7 254 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 OR51I2Q9H344 312 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 BPIFA1Q9NP55 256 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 TMEM30AQ9NV96 361 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 MRPL22Q9NWU5 206 aaKnown RBP4.25□□□□□ -1.73
SF3B1-207ENST00000468925 PRSS50Q9UI38 385 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 SLC7A7Q9UM01 511 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 DHDHQ9UQ10 334 aa4.25□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF443Q9Y2A4 671 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms