RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 MLLT11Q13015 90 aaPredicted RBP16.53■□□□□ 0.24
NPHP4-206ENST00000468253 TRAM1Q15629 374 aa16.53■□□□□ 0.24
NPHP4-206ENST00000468253 TBCEQ15813 527 aaPredicted RBP16.53■□□□□ 0.24
NPHP4-206ENST00000468253 ACSM3Q53FZ2 586 aa16.53■□□□□ 0.24
NPHP4-206ENST00000468253 KLF17Q5JT82 389 aaPredicted RBP16.53■□□□□ 0.24
NPHP4-206ENST00000468253 SATL1Q86VE3 508 aa16.53■□□□□ 0.24
NPHP4-206ENST00000468253 FGFRL1Q8N441 504 aa16.53■□□□□ 0.24
NPHP4-206ENST00000468253 KIR3DL3Q8N743 410 aa16.53■□□□□ 0.24
NPHP4-206ENST00000468253 TMEM185AQ8NFB2 350 aa16.53■□□□□ 0.24
NPHP4-206ENST00000468253 PHYHIPQ92561 330 aa16.53■□□□□ 0.24
NPHP4-206ENST00000468253 UFD1Q92890 307 aa16.53■□□□□ 0.24
NPHP4-206ENST00000468253 RFT1Q96AA3 541 aa16.53■□□□□ 0.24
NPHP4-206ENST00000468253 SNX22Q96L94 193 aa16.53■□□□□ 0.24
NPHP4-206ENST00000468253 WDFY2Q96P53 400 aa16.53■□□□□ 0.24
NPHP4-206ENST00000468253 OR14A2Q96R54 314 aa16.53■□□□□ 0.24
NPHP4-206ENST00000468253 RBFOX1Q9NWB1 397 aaKnown RBP16.53■□□□□ 0.24
NPHP4-206ENST00000468253 OR14J1Q9UGF5 321 aa16.53■□□□□ 0.24
NPHP4-206ENST00000468253 MEGF11A6BM72 1044 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 SH2D1BO14796 132 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 PIN1P1O15428 100 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 ZNF737O75373 536 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 INMTO95050 263 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 EPHA1P21709 976 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 LMO1P25800 156 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 ZNF93P35789 620 aaPredicted RBP16.52■□□□□ 0.24
NPHP4-206ENST00000468253 MTNR1BP49286 362 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 ARF6P62330 175 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 COL10A1Q03692 680 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 PDCD1Q15116 288 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 TUSC1Q2TAM9 212 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 ARMCX4Q5H9R4 360 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 METTL11BQ5VVY1 283 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 USP43Q70EL4 1123 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 CMTM4Q8IZR5 234 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 GPER1Q99527 375 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 MGLLQ99685 303 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 PCDHB16Q9NRJ7 776 aa16.52■□□□□ 0.24
NPHP4-206ENST00000468253 SC5DO75845 299 aa16.51■□□□□ 0.23
NPHP4-206ENST00000468253 TOX4O94842 621 aa16.51■□□□□ 0.23
NPHP4-206ENST00000468253 HAND1O96004 215 aa16.51■□□□□ 0.23
NPHP4-206ENST00000468253 SFTPBP07988 381 aa16.51■□□□□ 0.23
NPHP4-206ENST00000468253 CPEP16870 476 aa16.51■□□□□ 0.23
NPHP4-206ENST00000468253 PRKACAP17612 351 aa16.51■□□□□ 0.23
NPHP4-206ENST00000468253 PSMA1P25786 263 aaKnown RBP16.51■□□□□ 0.23
NPHP4-206ENST00000468253 CAPZA1P52907 286 aa16.51■□□□□ 0.23
NPHP4-206ENST00000468253 DDI2Q5TDH0 399 aa16.51■□□□□ 0.23
NPHP4-206ENST00000468253 BATF2Q8N1L9 274 aa16.51■□□□□ 0.23
NPHP4-206ENST00000468253 OR5D18Q8NGL1 313 aa16.51■□□□□ 0.23
NPHP4-206ENST00000468253 H1FXQ92522 213 aaKnown RBP16.51■□□□□ 0.23
NPHP4-206ENST00000468253 SIRPDQ9H106 197 aa16.51■□□□□ 0.23
NPHP4-206ENST00000468253 NOX4Q9NPH5 578 aa16.51■□□□□ 0.23
NPHP4-206ENST00000468253 ACOT13Q9NPJ3 140 aa16.51■□□□□ 0.23
NPHP4-206ENST00000468253 IL36GQ9NZH8 169 aa16.51■□□□□ 0.23
NPHP4-206ENST00000468253 TRAV8-7A0A075B6U6 113 aa16.5■□□□□ 0.23
NPHP4-206ENST00000468253 M0R1W7 72 aa16.5■□□□□ 0.23
NPHP4-206ENST00000468253 GABRPO00591 440 aa16.5■□□□□ 0.23
NPHP4-206ENST00000468253 HSMCR30P0CW71 290 aa16.5■□□□□ 0.23
NPHP4-206ENST00000468253 MAP2K4P45985 399 aa16.5■□□□□ 0.23
NPHP4-206ENST00000468253 CEBPDP49716 269 aaPredicted RBP16.5■□□□□ 0.23
NPHP4-206ENST00000468253 EMX1Q04741 257 aaPredicted RBP16.5■□□□□ 0.23
NPHP4-206ENST00000468253 LIPKQ5VXJ0 399 aa16.5■□□□□ 0.23
NPHP4-206ENST00000468253 C9orf139Q6ZV77 190 aa16.5■□□□□ 0.23
NPHP4-206ENST00000468253 ZNF367Q7RTV3 350 aa16.5■□□□□ 0.23
NPHP4-206ENST00000468253 SVOPQ8N4V2 548 aa16.5■□□□□ 0.23
NPHP4-206ENST00000468253 OR51T1Q8NGJ9 327 aa16.5■□□□□ 0.23
NPHP4-206ENST00000468253 PPP1R35Q8TAP8 253 aa16.5■□□□□ 0.23
NPHP4-206ENST00000468253 TNFAIP8L1Q8WVP5 186 aa16.5■□□□□ 0.23
NPHP4-206ENST00000468253 UNKLQ9H9P5 680 aaKnown RBP16.5■□□□□ 0.23
NPHP4-206ENST00000468253 A0A1W2PPH5 198 aa16.49■□□□□ 0.23
NPHP4-206ENST00000468253 A0A1W2PPK0 400 aa16.49■□□□□ 0.23
NPHP4-206ENST00000468253 ZNF780AO75290 641 aaPredicted RBP16.49■□□□□ 0.23
NPHP4-206ENST00000468253 RPL31P62899 125 aaKnown RBP16.49■□□□□ 0.23
NPHP4-206ENST00000468253 C17orf107Q6ZR85 190 aa16.49■□□□□ 0.23
NPHP4-206ENST00000468253 LYPD6Q86Y78 171 aa16.49■□□□□ 0.23
NPHP4-206ENST00000468253 PHC2Q8IXK0 858 aa16.49■□□□□ 0.23
NPHP4-206ENST00000468253 OR8H2Q8N162 312 aa16.49■□□□□ 0.23
NPHP4-206ENST00000468253 CHST4Q8NCG5 386 aa16.49■□□□□ 0.23
NPHP4-206ENST00000468253 ZNF418Q8TF45 676 aaPredicted RBP16.49■□□□□ 0.23
NPHP4-206ENST00000468253 ORAI1Q96D31 301 aa16.49■□□□□ 0.23
NPHP4-206ENST00000468253 TBX15Q96SF7 602 aa16.49■□□□□ 0.23
NPHP4-206ENST00000468253 TMED9Q9BVK6 235 aa16.49■□□□□ 0.23
NPHP4-206ENST00000468253 METTL9Q9H1A3 318 aa16.49■□□□□ 0.23
NPHP4-206ENST00000468253 GSTK1Q9Y2Q3 226 aa16.49■□□□□ 0.23
NPHP4-206ENST00000468253 TMEM82A0PJX8 343 aa16.48■□□□□ 0.23
NPHP4-206ENST00000468253 TCF21O43680 179 aa16.48■□□□□ 0.23
NPHP4-206ENST00000468253 CD37P11049 281 aa16.48■□□□□ 0.23
NPHP4-206ENST00000468253 DUSP1P28562 367 aa16.48■□□□□ 0.23
NPHP4-206ENST00000468253 MEF2CQ06413 473 aaPredicted RBP16.48■□□□□ 0.23
NPHP4-206ENST00000468253 GPR176Q14439 515 aa16.48■□□□□ 0.23
NPHP4-206ENST00000468253 RSU1Q15404 277 aa16.48■□□□□ 0.23
NPHP4-206ENST00000468253 TMEM200BQ69YZ2 307 aa16.48■□□□□ 0.23
NPHP4-206ENST00000468253 METAP1DQ6UB28 335 aaPredicted RBP16.48■□□□□ 0.23
NPHP4-206ENST00000468253 CEACAM19Q7Z692 300 aa16.48■□□□□ 0.23
NPHP4-206ENST00000468253 ASCC1Q8N9N2 400 aaKnown RBP16.48■□□□□ 0.23
NPHP4-206ENST00000468253 S100A13Q99584 98 aa16.48■□□□□ 0.23
NPHP4-206ENST00000468253 UQCC2Q9BRT2 126 aa16.48■□□□□ 0.23
NPHP4-206ENST00000468253 PCGF1Q9BSM1 259 aa16.48■□□□□ 0.23
NPHP4-206ENST00000468253 SUCNR1Q9BXA5 334 aa16.48■□□□□ 0.23
NPHP4-206ENST00000468253 OCEL1Q9H607 264 aa16.48■□□□□ 0.23
NPHP4-206ENST00000468253 EXOSC4Q9NPD3 245 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms