RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 CLHC1Q8NHS4 586 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 TMEM239Q8WW34 195 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 ITFG2Q969R8 447 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 OR2A7Q96R45 310 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 PEBP4Q96S96 227 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 OR52A5Q9H2C5 316 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 METTL8Q9H825 291 aaKnown RBP2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 SND1-IT1Q9HBX3 110 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 DNAJC27Q9NZQ0 273 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 TAC3Q9UHF0 121 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 POFUT2Q9Y2G5 429 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 SLC22A7Q9Y694 548 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 RPRD2Q5VT52 1461 aaKnown RBP2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 LOC389332A0A1B0GUA5 103 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 CD300LBA8K4G0 201 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 NDUFS6O75380 124 aaKnown RBP2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 CDK1P06493 297 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 PFN1P07737 140 aaKnown RBP2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 OR5AC1P0C628 307 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 SEC11BP0C7V7 166 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 IMPA1P29218 277 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 TUFMP49411 452 aaKnown RBP2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 USF2Q15853 346 aaPredicted RBP2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 SSX1Q16384 188 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 TMEM69Q5SWH9 247 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 SGPP2Q8IWX5 399 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 FAM9CQ8IZT9 166 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 ACBD4Q8NC06 268 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 ZNF680Q8NEM1 530 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 BLNKQ8WV28 456 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 NELFBQ8WX92 580 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 ARL5BQ96KC2 179 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 ZNF396Q96N95 335 aaPredicted RBP2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 BBS2Q9BXC9 721 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 BEX2Q9BXY8 128 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 ASB7Q9H672 318 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 TMBIM4Q9HC24 238 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 DHCR7Q9UBM7 475 aaKnown RBP2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 MYO3BQ8WXR4 1341 aa2.33□□□□□ -2.04
CDC42BPA-211ENST00000466538 UNC13AQ9UPW8 1703 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 A0A1B0GW15 77 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 IZUMO1RA6ND01 250 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 CLDN34H7C241 214 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 PLPP3O14495 311 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 COX7A2P2O60397 106 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 CNMDO75829 334 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 KCNK2O95069 426 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 YEATS4O95619 227 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 FSTL3O95633 263 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 NRASP01111 189 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 HRASP01112 189 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 KRASP01116 189 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 SLC6A1P30531 599 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 PLTPP55058 493 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 BNIP2Q12982 314 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 FAM53BQ14153 422 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 CLEC18BQ6UXF7 455 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 DAZ4Q86SG3 579 aaKnown RBP2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 SYCE1Q8N0S2 351 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 SPICQ8N5J4 248 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 OR2Y1Q8NGV0 311 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 ANGPTL6Q8NI99 470 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 C22orf15Q8WYQ4 148 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 CPB2Q96IY4 423 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 YPEL4Q96NS1 127 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 CATSPER2Q96P56 530 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 SEC22CQ9BRL7 303 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 SRRQ9GZT4 340 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 DHX35Q9H5Z1 703 aaKnown RBP2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 FAM60AQ9NP50 221 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 DAZ1Q9NQZ3 744 aaKnown RBP2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 EURLQ9NYK6 297 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 NXT1Q9UKK6 140 aaKnown RBP2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 USH1CQ9Y6N9 552 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 ZNF780BQ9Y6R6 833 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 NRCAMQ92823 1304 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 AK9Q5TCS8 1911 aa2.32□□□□□ -2.04
CDC42BPA-211ENST00000466538 BAZ2AQ9UIF9 1905 aaKnown RBP2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 TRIP11Q15643 1979 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 F8VP50 259 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 RGS5O15539 181 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 CRXO43186 299 aaPredicted RBP2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 ENSAO43768 121 aaKnown RBP2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 DHRS3O75911 302 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 CXorf1O96002 111 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 RNASE2P10153 161 aaKnown RBP2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 ZNF3P17036 446 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 GTF2H1P32780 548 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 RPA3P35244 121 aaPredicted RBP2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 SPAM1P38567 509 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 TTPAP49638 278 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 CCL23P55773 120 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 MAP3K7CLP57077 242 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 KRTAP10-10P60014 251 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 RPS11P62280 158 aaKnown RBP eCLIP2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 STX3Q13277 289 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 GPR176Q14439 515 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 Q499Y3 187 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 UBE2NLQ5JXB2 153 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms