RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 PEG10Q86TG7 708 aaKnown RBP11.59□□□□□ -0.55
UBE4B-206ENST00000466379 C17orf78Q8N4C9 275 aa11.59□□□□□ -0.55
UBE4B-206ENST00000466379 PHB2Q99623 299 aa11.59□□□□□ -0.55
UBE4B-206ENST00000466379 PDCD10Q9BUL8 212 aa11.59□□□□□ -0.55
UBE4B-206ENST00000466379 FAM215AQ9Y5M1 114 aa11.59□□□□□ -0.55
UBE4B-206ENST00000466379 CUL9Q8IWT3 2517 aa11.59□□□□□ -0.55
UBE4B-206ENST00000466379 CACNA1GO43497 2377 aa11.59□□□□□ -0.55
UBE4B-206ENST00000466379 BSNQ9UPA5 3926 aa11.59□□□□□ -0.55
UBE4B-206ENST00000466379 MBD3L4A6NDZ8 208 aaPredicted RBP11.58□□□□□ -0.55
UBE4B-206ENST00000466379 MBD3L3A6NE82 208 aaPredicted RBP11.58□□□□□ -0.55
UBE4B-206ENST00000466379 MBD3L5A6NJ08 208 aaPredicted RBP11.58□□□□□ -0.55
UBE4B-206ENST00000466379 CNOT4O95628 575 aaKnown RBP11.58□□□□□ -0.55
UBE4B-206ENST00000466379 CGAP01215 116 aa11.58□□□□□ -0.55
UBE4B-206ENST00000466379 PGAM2P15259 253 aa11.58□□□□□ -0.55
UBE4B-206ENST00000466379 CBR1P16152 277 aa11.58□□□□□ -0.55
UBE4B-206ENST00000466379 PRKACAP17612 351 aa11.58□□□□□ -0.55
UBE4B-206ENST00000466379 MPV17P39210 176 aa11.58□□□□□ -0.55
UBE4B-206ENST00000466379 TAS2R31P59538 309 aa11.58□□□□□ -0.55
UBE4B-206ENST00000466379 FAHD2BQ6P2I3 314 aaPredicted RBP11.58□□□□□ -0.55
UBE4B-206ENST00000466379 WDR86Q86TI4 376 aa11.58□□□□□ -0.55
UBE4B-206ENST00000466379 CCDC36Q8IYA8 594 aa11.58□□□□□ -0.55
UBE4B-206ENST00000466379 MBD3L2Q8NHZ7 208 aaPredicted RBP11.58□□□□□ -0.55
UBE4B-206ENST00000466379 FAHD2AQ96GK7 314 aa11.58□□□□□ -0.55
UBE4B-206ENST00000466379 ABHD17AQ96GS6 310 aa11.58□□□□□ -0.55
UBE4B-206ENST00000466379 DMXL2Q8TDJ6 3036 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 CEACAM18A8MTB9 384 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 MCRIP1C9JLW8 97 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 L7N2F9 121 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 KNG1P01042 644 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 OR5H8P0DN80 308 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 NFYAP23511 347 aaPredicted RBP11.58□□□□□ -0.56
UBE4B-206ENST00000466379 DTYMKP23919 212 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 CALCRP30988 508 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 UCP2P55851 309 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 GNG3P63215 75 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 SUPT4H1P63272 117 aaKnown RBP11.58□□□□□ -0.56
UBE4B-206ENST00000466379 TMEM95Q3KNT9 176 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 LRRC37A5PQ49AS3 106 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 TMEM128Q5BJH2 165 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 TEX261Q6UWH6 196 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 CLEC18BQ6UXF7 455 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 FBXW12Q6X9E4 464 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 MKXQ8IYA7 352 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 SAXO1Q8IYX7 474 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 TMEM185AQ8NFB2 350 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 Q8NFD4 153 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 LILRB4Q8NHJ6 448 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 EXTL1Q92935 676 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 EDARQ9UNE0 448 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 U3KQ87 197 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 APC2O95996 2303 aa11.58□□□□□ -0.56
UBE4B-206ENST00000466379 ATMQ13315 3056 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 RRP8O43159 456 aaKnown RBP11.57□□□□□ -0.56
UBE4B-206ENST00000466379 DUS4LO95620 317 aaKnown RBP11.57□□□□□ -0.56
UBE4B-206ENST00000466379 IGKV3-15P01624 115 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 GMFBP60983 142 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 SEC61A1P61619 476 aaKnown RBP11.57□□□□□ -0.56
UBE4B-206ENST00000466379 IKZF1Q13422 519 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 ELP2Q6IA86 826 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 TMEM200AQ86VY9 491 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 SPACA3Q8IXA5 215 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 CHMP1AQ9HD42 196 aaPredicted RBP11.57□□□□□ -0.56
UBE4B-206ENST00000466379 ZNF71Q9NQZ8 489 aaPredicted RBP11.57□□□□□ -0.56
UBE4B-206ENST00000466379 FZR1Q9UM11 496 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 TP53TG5Q9Y2B4 290 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 ANKRD11Q6UB99 2663 aaPredicted RBP11.57□□□□□ -0.56
UBE4B-206ENST00000466379 OR5B21A6NL26 309 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 EEF1E1-BLOC1S5C9J1V9 151 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 H0YL77 283 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 MKRN2OSH3BPM6 223 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 SFT2D2O95562 160 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 CECR9P0C854 216 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 SELEP16581 610 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 PSG7Q13046 419 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 OPCMLQ14982 345 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 ZNF660Q6AZW8 331 aaPredicted RBP11.57□□□□□ -0.56
UBE4B-206ENST00000466379 ZNF573Q86YE8 665 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 C1orf162Q8NEQ5 155 aaPredicted RBP11.57□□□□□ -0.56
UBE4B-206ENST00000466379 OR51I2Q9H344 312 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 C12orf4Q9NQ89 552 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 NECAP2Q9NVZ3 263 aa11.57□□□□□ -0.56
UBE4B-206ENST00000466379 C13orf42A0A1B0GVH6 325 aa11.56□□□□□ -0.56
UBE4B-206ENST00000466379 RGS11O94810 467 aa11.56□□□□□ -0.56
UBE4B-206ENST00000466379 CFDP00746 253 aaPredicted RBP11.56□□□□□ -0.56
UBE4B-206ENST00000466379 CRYABP02511 175 aaKnown RBP11.56□□□□□ -0.56
UBE4B-206ENST00000466379 FOSL1P15407 271 aa11.56□□□□□ -0.56
UBE4B-206ENST00000466379 ANKRD55Q3KP44 614 aa11.56□□□□□ -0.56
UBE4B-206ENST00000466379 C1orf185Q5T7R7 199 aa11.56□□□□□ -0.56
UBE4B-206ENST00000466379 ZNF767PQ75MW2 155 aa11.56□□□□□ -0.56
UBE4B-206ENST00000466379 BHLHA15Q7RTS1 189 aaPredicted RBP11.56□□□□□ -0.56
UBE4B-206ENST00000466379 ZNF680Q8NEM1 530 aa11.56□□□□□ -0.56
UBE4B-206ENST00000466379 KLF14Q8TD94 323 aaPredicted RBP11.56□□□□□ -0.56
UBE4B-206ENST00000466379 TOMM40LQ969M1 308 aa11.56□□□□□ -0.56
UBE4B-206ENST00000466379 FAM210AQ96ND0 272 aa11.56□□□□□ -0.56
UBE4B-206ENST00000466379 SCGB3A2Q96PL1 93 aa11.56□□□□□ -0.56
UBE4B-206ENST00000466379 ADAT1Q9BUB4 502 aaKnown RBP11.56□□□□□ -0.56
UBE4B-206ENST00000466379 ITGB1BP2Q9UKP3 347 aa11.56□□□□□ -0.56
UBE4B-206ENST00000466379 A6NJY4 79 aa11.56□□□□□ -0.56
UBE4B-206ENST00000466379 M0R233 179 aa11.56□□□□□ -0.56
UBE4B-206ENST00000466379 ERVH48-1M5A8F1 160 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms