RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 MRI1Q9BV20 369 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 TM2D1Q9BX74 207 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 TMEM59Q9BXS4 323 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 CST11Q9H112 138 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 LPAR5Q9H1C0 372 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 BANF2Q9H503 90 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 SEBOXQ9HB31 216 aaPredicted RBP9.32□□□□□ -0.92
VCP-204ENST00000466100 TMEM165Q9HC07 324 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 ZNF581Q9P0T4 197 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 NLKQ9UBE8 527 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 SPATA2Q9UM82 520 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 PPIAL4AQ9Y536 164 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 ETV7Q9Y603 341 aa9.32□□□□□ -0.92
VCP-204ENST00000466100 A0A075B6Q4 140 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 A0A096LNT2 108 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 TRAV38-1A0A0B4J264 116 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 OR2AT4A6NND4 320 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 FOXI3A8MTJ6 420 aaPredicted RBP9.31□□□□□ -0.92
VCP-204ENST00000466100 NDUFS8O00217 210 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 PPIHO43447 177 aaKnown RBP9.31□□□□□ -0.92
VCP-204ENST00000466100 CRTAPO75718 401 aaPredicted RBP9.31□□□□□ -0.92
VCP-204ENST00000466100 MPIG6BO95866 241 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 CSTBP04080 98 aaKnown RBP9.31□□□□□ -0.92
VCP-204ENST00000466100 TFF1P04155 84 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 SOX6P35712 828 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 MDH2P40926 338 aaKnown RBP9.31□□□□□ -0.92
VCP-204ENST00000466100 GPR6P46095 362 aaPredicted RBP9.31□□□□□ -0.92
VCP-204ENST00000466100 DSCR9P59020 149 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 MICBQ29980 383 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 TMEM155Q4W5P6 130 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 AVPI1Q5T686 147 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 ATPAF1Q5TC12 328 aaPredicted RBP9.31□□□□□ -0.92
VCP-204ENST00000466100 SFRP4Q6FHJ7 346 aaPredicted RBP9.31□□□□□ -0.92
VCP-204ENST00000466100 CLEC2AQ6UVW9 174 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 PRSS57Q6UWY2 283 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 FAM89BQ8N5H3 189 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 CD177Q8N6Q3 437 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 ACOT12Q8WYK0 555 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 FAM168AQ92567 244 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 POM121Q96HA1 1249 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 TMEM246Q9BRR3 403 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 SELENOIQ9C0D9 397 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 BPESC1Q9GZL8 116 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 IFT22Q9H7X7 185 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 PCDHB16Q9NRJ7 776 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 DNAJB11Q9UBS4 358 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 RAB22AQ9UL26 194 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 ST3GAL6Q9Y274 331 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 A3GALT2U3KPV4 340 aa9.31□□□□□ -0.92
VCP-204ENST00000466100 ACANP16112 2415 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 IGHV4-30-2A0A087WSY4 118 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 A0A1B0GW55 424 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 FAM90A10PA6NDY2 464 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 FAM90A18PA6NE21 464 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 FAM90A16PA6NEW6 464 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 FAM90A20PA6NIJ5 464 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 FAM90A8PA6NJQ4 464 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 FAM90A7PA6NKC0 464 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 RFPL4AA6NLU0 287 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 FAM90A22PA8MWA6 464 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 FAM90A12PA8MX19 464 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 FAM90A5PA8MXJ8 464 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 FAM90A23PA8MXZ1 464 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 F5H0A9 414 aaPredicted RBP9.3□□□□□ -0.92
VCP-204ENST00000466100 RFPL4AL1F8VTS6 287 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 GEMIN2O14893 280 aaKnown RBP9.3□□□□□ -0.92
VCP-204ENST00000466100 FCN3O75636 299 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 GYPAP02724 150 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 FAM90A15PP0C7V4 464 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 FAM90A13PP0C7W8 464 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 FAM90A14PP0C7W9 464 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 FAM90A24PP0C7X0 464 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 DUX4L2P0CJ85 424 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 DUX4L3P0CJ86 424 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 DUX4L4P0CJ87 422 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 DUX4L5P0CJ88 424 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 DUX4L6P0CJ89 424 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 DUX4L7P0CJ90 424 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 DUSP1P28562 367 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 CEBPDP49716 269 aaPredicted RBP9.3□□□□□ -0.92
VCP-204ENST00000466100 SNU13P55769 128 aaKnown RBP9.3□□□□□ -0.92
VCP-204ENST00000466100 CARTPTQ16568 116 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 CLEC12BQ2HXU8 276 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 MPV17LQ2QL34 196 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 Q5PR19 223 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 SIGIRRQ6IA17 410 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 DUX4L9Q6RFH8 374 aaPredicted RBP9.3□□□□□ -0.92
VCP-204ENST00000466100 ZNF788Q6ZQV5 615 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 LINC00596Q86U02 117 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 DEFB108BQ8NET1 73 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 OR5T2Q8NGG2 359 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 AP3S1Q92572 193 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 RAB1CQ92928 201 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 SDSLQ96GA7 329 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 TIMD4Q96H15 378 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 CYYR1Q96J86 154 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 GAFA1Q96PS6 74 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 FOXC2Q99958 501 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 NICN1Q9BSH3 213 aa9.3□□□□□ -0.92
VCP-204ENST00000466100 DNTTIP1Q9H147 329 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms