RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 CFL1P23528 166 aaKnown RBP11.7□□□□□ -0.54
HDAC6-214ENST00000465269 BRS3P32247 399 aa11.7□□□□□ -0.54
HDAC6-214ENST00000465269 GRB2P62993 217 aaKnown RBP11.7□□□□□ -0.54
HDAC6-214ENST00000465269 UTF1Q5T230 341 aa11.7□□□□□ -0.54
HDAC6-214ENST00000465269 RNFT2Q96EX2 444 aa11.7□□□□□ -0.54
HDAC6-214ENST00000465269 CIB1Q99828 191 aa11.7□□□□□ -0.54
HDAC6-214ENST00000465269 ZNF556Q9HAH1 456 aa11.7□□□□□ -0.54
HDAC6-214ENST00000465269 MITFO75030 526 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-214ENST00000465269 NXPH2O95156 264 aa11.69□□□□□ -0.54
HDAC6-214ENST00000465269 SOX14O95416 240 aa11.69□□□□□ -0.54
HDAC6-214ENST00000465269 SLC15A1P46059 708 aa11.69□□□□□ -0.54
HDAC6-214ENST00000465269 SRSF7Q16629 238 aaKnown RBP eCLIP11.69□□□□□ -0.54
HDAC6-214ENST00000465269 PRAMEF5Q5TYX0 476 aa11.69□□□□□ -0.54
HDAC6-214ENST00000465269 RASSF6Q6ZTQ3 369 aa11.69□□□□□ -0.54
HDAC6-214ENST00000465269 MOB3CQ70IA8 216 aa11.69□□□□□ -0.54
HDAC6-214ENST00000465269 OR2T4Q8NH00 348 aa11.69□□□□□ -0.54
HDAC6-214ENST00000465269 OR8U1Q8NH10 309 aa11.69□□□□□ -0.54
HDAC6-214ENST00000465269 ABHD6Q9BV23 337 aa11.69□□□□□ -0.54
HDAC6-214ENST00000465269 PAPOLBQ9NRJ5 636 aaKnown RBP11.69□□□□□ -0.54
HDAC6-214ENST00000465269 RASL12Q9NYN1 266 aa11.69□□□□□ -0.54
HDAC6-214ENST00000465269 MOB4Q9Y3A3 225 aa11.69□□□□□ -0.54
HDAC6-214ENST00000465269 RRP15Q9Y3B9 282 aaKnown RBP11.69□□□□□ -0.54
HDAC6-214ENST00000465269 HSPE1-MOB4S4R3N1 261 aa11.69□□□□□ -0.54
HDAC6-214ENST00000465269 H3BN98 237 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 ZNF737O75373 536 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 MYF6P23409 242 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 FMO3P31513 532 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 GDNFP39905 211 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 HNF4GQ14541 408 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 KIR2DS1Q14954 304 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 LRRC36Q1X8D7 754 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 CEACAM21Q3KPI0 293 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 LPCAT4Q643R3 524 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 FAHD1Q6P587 224 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 CD300LDQ6UXZ3 194 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 ABHD12Q8N2K0 398 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 SLC37A3Q8NCC5 494 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 OR6K6Q8NGW6 343 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 SLC29A1Q99808 456 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 TSSK6Q9BXA6 273 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 OSBPL10Q9BXB5 764 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 ABCB9Q9NP78 766 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 IL20Q9NYY1 176 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 SLC22A13Q9Y226 551 aa11.68□□□□□ -0.54
HDAC6-214ENST00000465269 ABCA13Q86UQ4 5058 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 TMEM82A0PJX8 343 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 OPRL1P41146 370 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 SNCBQ16143 134 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 KIAA2026Q5HYC2 2103 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 ASPHD1Q5U4P2 390 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 PLCXD3Q63HM9 321 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 KDM4DQ6B0I6 523 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 FAM53AQ6NSI3 398 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-214ENST00000465269 ZBTB49Q6ZSB9 765 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 GDPD3Q7L5L3 318 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 STPG2Q8N412 459 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 CBR4Q8N4T8 237 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 C5orf56Q8N8D9 126 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 OR8B12Q8NGG6 310 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 OR8D4Q8NGM9 314 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 FAM81AQ8TBF8 368 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 RNF133Q8WVZ7 376 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 DDB2Q92466 427 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 EME1Q96AY2 570 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 NRIP2Q9BQI9 281 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 C9orf16Q9BUW7 83 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 GABARAPL1Q9H0R8 117 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 KRT84Q9NSB2 600 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 CDH10Q9Y6N8 788 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 TNCP24821 2201 aa11.67□□□□□ -0.54
HDAC6-214ENST00000465269 F8VVB4 439 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 F8VWA3 439 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 EI24O14681 340 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 LDLRAD4O15165 306 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 INMTO95050 263 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 OSMP13725 252 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 GP9P14770 177 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 HAAOP46952 286 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 SLC35B1P78383 322 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 CRMP1Q14194 572 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 TPTE2P1Q5T6R2 138 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 FAM27D1Q5T7N8 215 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 TMEM236Q5W0B7 351 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 RPL13AP3Q6NVV1 102 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 SLC35E3Q7Z769 313 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 OR52L1Q8NGH7 329 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 OR6N2Q8NGY6 317 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 TRMT10AQ8TBZ6 339 aaKnown RBP11.66□□□□□ -0.54
HDAC6-214ENST00000465269 CHST6Q9GZX3 395 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 RGCCQ9H4X1 137 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 ISYNA1Q9NPH2 558 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 KIAA1456Q9P272 454 aa11.66□□□□□ -0.54
HDAC6-214ENST00000465269 M0QZK8 103 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 IDH3BO43837 385 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 H2BFMP0C1H6 154 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 IGHV4-30-4P0DP06 118 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 SPI1P17947 270 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 POLR2IP36954 125 aaKnown RBP11.65□□□□□ -0.54
HDAC6-214ENST00000465269 CRISP1P54107 249 aa11.65□□□□□ -0.54
HDAC6-214ENST00000465269 BDH1Q02338 343 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms