RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 RAD51DO75771 328 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 DHRS3O75911 302 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 DDAH2O95865 285 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 HIST1H2BJP06899 126 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 KLK3P07288 261 aaPredicted RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 CTXN2P0C2S0 81 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 LINC00271P0C7V0 271 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 HOXB2P14652 356 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 MYOGP15173 224 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 ZNF43P17038 809 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 PI3P19957 117 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 HIST1H2BOP23527 126 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 HIST1H2BBP33778 126 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 NKX2-1P43699 371 aaPredicted RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 CCR5P51681 352 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 ZNF41P51814 821 aaPredicted RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 TMEM50BP56557 158 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 ZNF121P58317 390 aaPredicted RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 HIST1H2BDP58876 126 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 TAS2R30P59541 319 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 RND3P61587 244 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 RPL23AP62750 156 aaKnown RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 HIST1H2BCP62807 126 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 MESP2Q0VG99 397 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 USF2Q15853 346 aaPredicted RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 SRSF7Q16629 238 aaKnown RBP eCLIP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 HIST2H2BEQ16778 126 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 IQCJQ1A5X6 159 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 MS4A18Q3C1V0 323 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 COA6Q5JTJ3 125 aaKnown RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 FIP1L1Q6UN15 594 aaKnown RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 Q6ZSR3 168 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 CMTM1Q8IZ96 169 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 FBXL14Q8N1E6 418 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 TMEM104Q8NE00 496 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 GJC3Q8NFK1 279 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 OR10A7Q8NGE5 316 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 OR8B12Q8NGG6 310 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 OR1N1Q8NGS0 311 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 OR6X1Q8NH79 312 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 SCGB1C1Q8TD33 95 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 ZNF721Q8TF20 911 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 SSC4DQ8WTU2 575 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 HIST1H2BHQ93079 126 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 MRPL24Q96A35 216 aaKnown RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 TMEM18Q96B42 140 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 PINX1Q96BK5 328 aaKnown RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 BOD1Q96IK1 185 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 SHDQ96IW2 340 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 HIST1H2BNQ99877 126 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 HIST1H2BMQ99879 126 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 NDUFAF3Q9BU61 184 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 WWTR1Q9GZV5 400 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 MTIF3Q9H2K0 278 aaKnown RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 NKX2-4Q9H2Z4 354 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 PRDM13Q9H4Q3 707 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 BANF2Q9H503 90 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 SRD5A3Q9H8P0 318 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 ELL3Q9HB65 397 aaPredicted RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 STARD5Q9NSY2 213 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 LYRM2Q9NU23 88 aaPredicted RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 CISD1Q9NZ45 108 aaKnown RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 VAX2Q9UIW0 290 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 CA14Q9ULX7 337 aa6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 RCL1Q9Y2P8 373 aaKnown RBP6.28□□□□□ -1.4
CLSTN1-204ENST00000464286 IGKV3D-11A0A0A0MRZ8 115 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 TRBV23-1A0A0A0MS06 115 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 FAM90A10PA6NDY2 464 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 FAM90A18PA6NE21 464 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 FAM90A16PA6NEW6 464 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 OTOL1A6NHN0 477 aaPredicted RBP6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 FAM90A20PA6NIJ5 464 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 FAM90A8PA6NJQ4 464 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 LIPT2A6NK58 231 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 FAM90A7PA6NKC0 464 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 FAM90A22PA8MWA6 464 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 FAM90A12PA8MX19 464 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 FAM90A5PA8MXJ8 464 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 FAM90A23PA8MXZ1 464 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 C9J4A7 227 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 K7EQS6 105 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 SDCBPO00560 298 aaPredicted RBP6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 LMX1BO60663 402 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 MPZL1O95297 269 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 FAM90A15PP0C7V4 464 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 FAM90A13PP0C7W8 464 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 FAM90A14PP0C7W9 464 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 FAM90A24PP0C7X0 464 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 TMEM225BP0DP42 221 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 SPTBP11277 2137 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 SLC25A6P12236 298 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 DAOP14920 347 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 PAX1P15863 534 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 BCKDHBP21953 392 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 CD200P41217 278 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 KIR2DL1P43626 348 aaPredicted RBP6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 CAPZBP47756 277 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 LBX1P52954 281 aa6.27□□□□□ -1.41
CLSTN1-204ENST00000464286 BIDP55957 195 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms