RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 Q8IYB0 196 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 ENTHD1Q8IYW4 607 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 OSR2Q8N2R0 312 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 TPRX1Q8N7U7 411 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 OR52N4Q8NGI2 321 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 TRMT10AQ8TBZ6 339 aaKnown RBP13.76□□□□□ -0.21
HMGN1-210ENST00000464078 ZNF596Q8TC21 504 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 SLAMF9Q96A28 289 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 PLEKHA1Q9HB21 404 aa13.76□□□□□ -0.21
HMGN1-210ENST00000464078 UBE2J1Q9Y385 318 aaPredicted RBP13.76□□□□□ -0.21
HMGN1-210ENST00000464078 FAM230AA0A1W2PPH8 454 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 A6NIN4 97 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 B2RBV5 119 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 MGST3O14880 152 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 PSPNO60542 156 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 GATBO75879 557 aaKnown RBP13.75□□□□□ -0.21
HMGN1-210ENST00000464078 MMP23AO75900 390 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 IGHA1P01876 353 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 CD34P28906 385 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 P2RX3P56373 397 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 KHDC1LQ5JSQ8 128 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 HEPN1Q6WQI6 88 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 SLC25A26Q70HW3 274 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 HS3ST5Q8IZT8 346 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 OR51D1Q8NGF3 324 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 DNAJC9Q8WXX5 260 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 APOL4Q9BPW4 351 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 MCRIP2Q9BUT9 160 aaKnown RBP13.75□□□□□ -0.21
HMGN1-210ENST00000464078 CHST5Q9GZS9 411 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 HHLA2Q9UM44 414 aa13.75□□□□□ -0.21
HMGN1-210ENST00000464078 LEUTXA8MZ59 168 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 GNGT2O14610 69 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 GABRR1P24046 479 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 CD24P25063 80 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 SLC6A1P30531 599 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 OR3A1P47881 315 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 FUT6P51993 359 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 ZNF146Q15072 292 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 UBE2V2Q15819 145 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 SPIN3Q5JUX0 258 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 PLEKHG7Q6ZR37 379 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 EGFL6Q8IUX8 553 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 SLC35F2Q8IXU6 374 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 ABHD12Q8N2K0 398 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 EMG1Q92979 244 aaKnown RBP13.74□□□□□ -0.21
HMGN1-210ENST00000464078 CREB3L1Q96BA8 519 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 LRGUKQ96M69 825 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 CHST6Q9GZX3 395 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 GAL3ST2Q9H3Q3 398 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 ADGRL4Q9HBW9 690 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 TVP23BQ9NYZ1 205 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 IL36RNQ9UBH0 155 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 MRM2Q9UI43 246 aaKnown RBP13.74□□□□□ -0.21
HMGN1-210ENST00000464078 PCDHGB5Q9Y5G0 923 aa13.74□□□□□ -0.21
HMGN1-210ENST00000464078 TRBV2A0A0J9YWF9 115 aa13.73□□□□□ -0.21
HMGN1-210ENST00000464078 MAGEB4O15481 346 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-210ENST00000464078 CEACAM3P40198 252 aa13.73□□□□□ -0.21
HMGN1-210ENST00000464078 THBS3P49746 956 aa13.73□□□□□ -0.21
HMGN1-210ENST00000464078 CDC42P60953 191 aa13.73□□□□□ -0.21
HMGN1-210ENST00000464078 TRAPPC6BQ86SZ2 158 aa13.73□□□□□ -0.21
HMGN1-210ENST00000464078 CCDC54Q8NEL0 328 aa13.73□□□□□ -0.21
HMGN1-210ENST00000464078 STMN2Q93045 179 aa13.73□□□□□ -0.21
HMGN1-210ENST00000464078 CCDC124Q96CT7 223 aaKnown RBP13.73□□□□□ -0.21
HMGN1-210ENST00000464078 CLN6Q9NWW5 311 aa13.73□□□□□ -0.21
HMGN1-210ENST00000464078 KIAA2026Q5HYC2 2103 aa13.73□□□□□ -0.21
HMGN1-210ENST00000464078 PSMB11A5LHX3 300 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 AQP12BA6NM10 295 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 OOSP1A8MZH6 123 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 ZNF670-ZNF695F2Z2N8 137 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 PRKYO43930 277 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 PRKACGP22612 351 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 CRISP1P54107 249 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 RPL23AP62750 156 aaKnown RBP13.72□□□□□ -0.21
HMGN1-210ENST00000464078 HLA-DRB5Q30154 266 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 PRAMEF5Q5TYX0 476 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 MEPCEQ7L2J0 689 aaKnown RBP13.72□□□□□ -0.21
HMGN1-210ENST00000464078 CATSPERDQ86XM0 798 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 AQP12AQ8IXF9 295 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 DNAAF1Q8NEP3 725 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 CANT1Q8WVQ1 401 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 CORO2AQ92828 525 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 C10orf35Q96D05 121 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 BORCS8Q96FH0 119 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 PRRG3Q9BZD7 231 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 PAPOLBQ9NRJ5 636 aaKnown RBP13.72□□□□□ -0.21
HMGN1-210ENST00000464078 RBFOX1Q9NWB1 397 aaKnown RBP13.72□□□□□ -0.21
HMGN1-210ENST00000464078 TAS2R3Q9NYW6 316 aa13.72□□□□□ -0.21
HMGN1-210ENST00000464078 ZMAT5Q9UDW3 170 aaKnown RBP13.72□□□□□ -0.21
HMGN1-210ENST00000464078 A0A087X0M5 115 aa13.71□□□□□ -0.21
HMGN1-210ENST00000464078 TRGV10A0A0A0MS01 117 aa13.71□□□□□ -0.21
HMGN1-210ENST00000464078 A0A1B0GX30 115 aa13.71□□□□□ -0.21
HMGN1-210ENST00000464078 LY6LH3BQJ8 138 aa13.71□□□□□ -0.21
HMGN1-210ENST00000464078 SYT7O43581 403 aa13.71□□□□□ -0.21
HMGN1-210ENST00000464078 ENTPD6O75354 484 aa13.71□□□□□ -0.21
HMGN1-210ENST00000464078 NHLRC4P0CG21 123 aaPredicted RBP13.71□□□□□ -0.21
HMGN1-210ENST00000464078 CDK2P24941 298 aa13.71□□□□□ -0.21
HMGN1-210ENST00000464078 TPTE2P1Q5T6R2 138 aa13.71□□□□□ -0.21
HMGN1-210ENST00000464078 AADACL4Q5VUY2 407 aa13.71□□□□□ -0.21
HMGN1-210ENST00000464078 NXNL2Q5VZ03 156 aa13.71□□□□□ -0.21
HMGN1-210ENST00000464078 CCDC144NLQ6NUI1 221 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms