RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 ETV6P41212 452 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 TAF9Q16594 264 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 MOGAT2Q3SYC2 334 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 SPIN3Q5JUX0 258 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 ATPAF1Q5TC12 328 aaPredicted RBP12.02□□□□□ -0.49
COL6A1-202ENST00000463060 LURAP1LQ8IV03 231 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 C1orf87Q8N0U7 546 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 ANGPTL6Q8NI99 470 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 NUDT16L1Q9BRJ7 211 aaKnown RBP12.02□□□□□ -0.49
COL6A1-202ENST00000463060 URM1Q9BTM9 101 aaKnown RBP12.02□□□□□ -0.49
COL6A1-202ENST00000463060 GSX2Q9BZM3 304 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 PLEKHA6Q9Y2H5 1048 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 UNC79Q9P2D8 2635 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 A0A0A6YYH2 397 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 METTL21EPA6NDL7 271 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 A6NJ64 397 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 XRCC3O43542 346 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 INHBBP09529 407 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 IRF2P14316 349 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 MUC1P15941 1255 aaPredicted RBP12.01□□□□□ -0.49
COL6A1-202ENST00000463060 CPT2P23786 658 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 GIFP27352 417 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 DUSP1P28562 367 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 CD80P33681 288 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 MNDAP41218 407 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 PTH2RP49190 550 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 TMEM33P57088 247 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 LSAMPQ13449 338 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 FAM189A2Q15884 450 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 MPV17LQ2QL34 196 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 SMIM21Q3B7S5 101 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 STUMQ69YW2 141 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 CNIH2Q6PI25 160 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 METAP1DQ6UB28 335 aaPredicted RBP12.01□□□□□ -0.49
COL6A1-202ENST00000463060 LINC00596Q86U02 117 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 CD177Q8N6Q3 437 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 OR4M1Q8NGD0 313 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 S100A16Q96FQ6 103 aaKnown RBP12.01□□□□□ -0.49
COL6A1-202ENST00000463060 CYYR1Q96J86 154 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 GAL3ST1Q99999 423 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 ATG5Q9H1Y0 275 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 CHODLQ9H9P2 273 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 TMEM165Q9HC07 324 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 RCC2Q9P258 522 aaKnown RBP12.01□□□□□ -0.49
COL6A1-202ENST00000463060 NLKQ9UBE8 527 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 WIPI2Q9Y4P8 454 aa12.01□□□□□ -0.49
COL6A1-202ENST00000463060 PPIAL4EA0A075B759 164 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 OOEPA6NGQ2 149 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 RFPL4AA6NLU0 287 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 OR2AT4A6NND4 320 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 PPIAL4DF5H284 164 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 RFPL4AL1F8VTS6 287 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 TPPPO94811 219 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 ZNF205O95201 554 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 IGHV2-70P01814 119 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 HLA-DQB1P01920 261 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 PPIAL4FP0DN26 164 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 CDK2P24941 298 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 CHATP28329 748 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 PITPNBP48739 271 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 VEGFCP49767 419 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 GMFBP60983 142 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 PDCD1Q15116 288 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 ZMYND11Q15326 602 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 PLAC9Q5JTB6 97 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 SFRP4Q6FHJ7 346 aaPredicted RBP12□□□□□ -0.49
COL6A1-202ENST00000463060 RAB12Q6IQ22 244 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 DNM1P46Q6ZS02 220 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 RTN4RL2Q86UN3 420 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 BOLLQ8N9W6 283 aaKnown RBP12□□□□□ -0.49
COL6A1-202ENST00000463060 C19orf18Q8NEA5 215 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 OR5T2Q8NGG2 359 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 OR56B1Q8NGI3 324 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 OR10R2Q8NGX6 335 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 MBD6Q96DN6 1003 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12□□□□□ -0.49
COL6A1-202ENST00000463060 BEX4Q9NWD9 120 aaPredicted RBP12□□□□□ -0.49
COL6A1-202ENST00000463060 HSF4Q9ULV5 492 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 KCNK7Q9Y2U2 307 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 PPIAL4AQ9Y536 164 aa12□□□□□ -0.49
COL6A1-202ENST00000463060 POLQO75417 2590 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 IGHV3OR15-7A0A075B7D8 119 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 TRAV24A0A0B4J272 114 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 SH2D1BO14796 132 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 SCGNO76038 276 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 OR2H2O95918 312 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 HAND1O96004 215 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 GLAP06280 429 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 FUT3P21217 361 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 PRDX2P32119 198 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 S100A5P33763 92 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 MICBQ29980 383 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 ZNF260Q3ZCT1 412 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 ZNF788Q6ZQV5 615 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 MFSD4AQ8N468 514 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 SDSLQ96GA7 329 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 DIRAS2Q96HU8 199 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 DNTTIP1Q9H147 329 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 BARX1Q9HBU1 254 aaPredicted RBP11.99□□□□□ -0.49
COL6A1-202ENST00000463060 MYOZ1Q9NP98 299 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms