RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 TBL2Q9Y4P3 447 aaKnown RBP5.92□□□□□ -1.46
PTPRF-210ENST00000463041 GMPPBQ9Y5P6 360 aa5.92□□□□□ -1.46
PTPRF-210ENST00000463041 TET2Q6N021 2002 aaPredicted RBP5.92□□□□□ -1.46
PTPRF-210ENST00000463041 NOTCH3Q9UM47 2321 aa5.92□□□□□ -1.46
PTPRF-210ENST00000463041 IGKV1-9A0A0C4DH69 117 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 TRBV2A0A0J9YWF9 115 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 LOC100130705A0A1B0GUX0 176 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 TMEM82A0PJX8 343 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 FUOMA2VDF0 154 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 OR4C45A6NMZ5 311 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 VGLL3A8MV65 326 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 H3BUI4 141 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 EBAG9O00559 213 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 MGST3O14880 152 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 INMTO95050 263 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 HAND1O96004 215 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 OCM2P0CE71 109 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 OCMP0CE72 109 aaPredicted RBP5.91□□□□□ -1.46
PTPRF-210ENST00000463041 IGHV1-8P0DP01 117 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 PIPP12273 146 aaPredicted RBP5.91□□□□□ -1.46
PTPRF-210ENST00000463041 GABRB1P18505 474 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 AZGP1P25311 298 aaKnown RBP5.91□□□□□ -1.46
PTPRF-210ENST00000463041 LMO1P25800 156 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 ERP29P30040 261 aaKnown RBP5.91□□□□□ -1.46
PTPRF-210ENST00000463041 GABRA5P31644 462 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 NPBWR2P48146 333 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 EDDM3BP56851 147 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 NANOS3P60323 173 aaKnown RBP5.91□□□□□ -1.46
PTPRF-210ENST00000463041 RAB40BQ12829 278 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 ZNF273Q14593 569 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 KLHL22Q53GT1 634 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 SPIN3Q5JUX0 258 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 LPCAT4Q643R3 524 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 CRIP3Q6Q6R5 217 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 LIAT1Q6ZQX7 453 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 SERPINA12Q8IW75 414 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 SAXO1Q8IYX7 474 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 SYS1Q8N2H4 156 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 ZNF676Q8N7Q3 588 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 OR52N4Q8NGI2 321 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 OR5D14Q8NGL3 314 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 PIFOQ8TCI5 191 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 EMG1Q92979 244 aaKnown RBP5.91□□□□□ -1.46
PTPRF-210ENST00000463041 LGALS12Q96DT0 336 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 PELI1Q96FA3 418 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 C4orf36Q96KX1 117 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 ZNF714Q96N38 554 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 OPALINQ96PE5 141 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 SLC29A1Q99808 456 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 MMP27Q9H306 513 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 ZCCHC4Q9H5U6 513 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 RANBP3Q9H6Z4 567 aaPredicted RBP5.91□□□□□ -1.46
PTPRF-210ENST00000463041 S100A14Q9HCY8 104 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 HMG20AQ9NP66 347 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 FAM118AQ9NWS6 357 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 RPL36Q9Y3U8 105 aaKnown RBP5.91□□□□□ -1.46
PTPRF-210ENST00000463041 PCDHGB5Q9Y5G0 923 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 LINC00312Q9Y6C7 94 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 TGP01266 2768 aa5.91□□□□□ -1.46
PTPRF-210ENST00000463041 PLXNB1O43157 2135 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 TMEM212A6NML5 194 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 WIPF1O43516 503 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 PSPNO60542 156 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 KDM4BO94953 1096 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 IGHA1P01876 353 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 ARG1P05089 322 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 CCDC159P0C7I6 412 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 DBTP11182 482 aaKnown RBP5.9□□□□□ -1.46
PTPRF-210ENST00000463041 PRKACAP17612 351 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 BCL3P20749 454 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 GABRR1P24046 479 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 COX7A1P24310 79 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 DUSP1P28562 367 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 POU3F4P49335 361 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 BMXP51813 675 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 GBX2P52951 348 aaPredicted RBP5.9□□□□□ -1.46
PTPRF-210ENST00000463041 ZNF91Q05481 1191 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 GRK1Q15835 563 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 LY6EQ16553 131 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 MINOS1Q5TGZ0 78 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 ZNF626Q68DY1 528 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 ZNF782Q6ZMW2 699 aaPredicted RBP5.9□□□□□ -1.46
PTPRF-210ENST00000463041 PQLC1Q8N2U9 271 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 PARP16Q8N5Y8 322 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 OR4C13Q8NGP0 309 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 OR13C3Q8NGS6 347 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 OR5AK2Q8NH90 309 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 OR2T6Q8NHC8 308 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 RPS4Y2Q8TD47 263 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 CORO2AQ92828 525 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 FOXRED1Q96CU9 486 aaPredicted RBP5.9□□□□□ -1.46
PTPRF-210ENST00000463041 RDH12Q96NR8 316 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 ZNF649Q9BS31 505 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 ALG8Q9BVK2 526 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 NPFFR1Q9GZQ6 430 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 RBFOX1Q9NWB1 397 aaKnown RBP5.9□□□□□ -1.46
PTPRF-210ENST00000463041 ERVK13-1Q9NX77 482 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 AASSQ9UDR5 926 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 PITPNC1Q9UKF7 332 aa5.9□□□□□ -1.46
PTPRF-210ENST00000463041 MYRFQ9Y2G1 1151 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms