RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 SAT2Q96F10 170 aaPredicted RBP13□□□□□ -0.33
PTPRU-205ENST00000460170 CHST5Q9GZS9 411 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 DNPH1O43598 174 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 GALR2O43603 387 aaPredicted RBP13□□□□□ -0.33
PTPRU-205ENST00000460170 S100A8P05109 93 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 BVESQ8NE79 360 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 LINC00052Q96N35 136 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 COMMD5Q9GZQ3 224 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 GEMIN2O14893 280 aaKnown RBP13□□□□□ -0.33
PTPRU-205ENST00000460170 FGF7P21781 194 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 PDZD11Q5EBL8 140 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 OR10V1Q8NGI7 309 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 OR10X1Q8NGY0 326 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 ELF5Q9UKW6 265 aaPredicted RBP13□□□□□ -0.33
PTPRU-205ENST00000460170 PDCD11Q14690 1871 aaKnown RBP13□□□□□ -0.33
PTPRU-205ENST00000460170 UBE2L5PA0A1B0GUS4 154 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 MKRN2OSH3BPM6 223 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 AQP7O14520 342 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 MDH2P40926 338 aaKnown RBP12.99□□□□□ -0.33
PTPRU-205ENST00000460170 SLC25A38Q96DW6 304 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 OTOFQ9HC10 1997 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 ZNF891A8MT65 544 aaPredicted RBP12.99□□□□□ -0.33
PTPRU-205ENST00000460170 IL11P20809 199 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 NCR3LG1Q68D85 454 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 NECAP1Q8NC96 275 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 EPOPA6NHQ4 379 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 PIN1P1O15428 100 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 IGF2P01344 180 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 DEFA4P12838 97 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 TAS2R45P59539 299 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 CMTM2Q8TAZ6 248 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 ZNF385AQ96PM9 386 aaKnown RBP12.99□□□□□ -0.33
PTPRU-205ENST00000460170 TPRP12270 2363 aaKnown RBP12.99□□□□□ -0.33
PTPRU-205ENST00000460170 SLC25A6P12236 298 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 RAB4AP20338 218 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 TSPO2Q5TGU0 170 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 NUFIP2Q7Z417 695 aaKnown RBP12.99□□□□□ -0.33
PTPRU-205ENST00000460170 OR13G1Q8NGZ3 307 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 TRAF4Q9BUZ4 470 aaPredicted RBP12.99□□□□□ -0.33
PTPRU-205ENST00000460170 OR51I2Q9H344 312 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 STARD10Q9Y365 291 aa12.99□□□□□ -0.33
PTPRU-205ENST00000460170 IGLV1-36A0A0B4J1U3 117 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 LGALS4P56470 323 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 OR2Z1Q8NG97 314 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 OR13D1Q8NGV5 346 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 ADIPOR1Q96A54 375 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 GPR87Q9BY21 358 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 OR2H1Q9GZK4 316 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 MTCH1Q9NZJ7 389 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 KLK13Q9UKR3 277 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 WSB1Q9Y6I7 421 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 KLF4O43474 513 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 CNIH1O95406 144 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 ZIC2O95409 532 aaPredicted RBP12.98□□□□□ -0.33
PTPRU-205ENST00000460170 VSIG10L2P0DP72 767 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 UNQ9370/PRO34162Q6UXP9 181 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 ADAD2Q8NCV1 583 aaKnown RBP12.98□□□□□ -0.33
PTPRU-205ENST00000460170 TMEM38BQ9NVV0 291 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 NEUROG3Q9Y4Z2 214 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 THY1P04216 161 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 CYC1P08574 325 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 HES1Q14469 280 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 TUSC5Q8IXB3 177 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 SOX7Q9BT81 388 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 GPR35Q9HC97 309 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 IGKV1D-42A0A075B6H8 117 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 PNPP00491 289 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 ERHP84090 104 aaKnown RBP12.98□□□□□ -0.33
PTPRU-205ENST00000460170 COL19A1Q14993 1142 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 ZNF429Q86V71 674 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 RFESDQ8TAC1 157 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 CACNG5Q9UF02 275 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 VSIG4Q9Y279 399 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 PATJQ8NI35 1801 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 TRGV10A0A0A0MS01 117 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 M0R1X1 148 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 LYZL6O75951 148 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 SLC25A4P12235 298 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 LPAR6P43657 344 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 PPP1CBP62140 327 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 IGLV3-21P80748 117 aaPredicted RBP12.98□□□□□ -0.33
PTPRU-205ENST00000460170 TMEM267Q0VDI3 215 aaPredicted RBP12.98□□□□□ -0.33
PTPRU-205ENST00000460170 ALKBH6Q3KRA9 238 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 LIAT1Q6ZQX7 453 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 ABHD3Q8WU67 409 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 SLC35B3Q9H1N7 401 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.98□□□□□ -0.33
PTPRU-205ENST00000460170 UQCC1Q9NVA1 299 aa12.98□□□□□ -0.33
PTPRU-205ENST00000460170 PRSS44E7EML9 344 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 SPRY3O43610 288 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 RPS4XP62701 263 aaKnown RBP12.97□□□□□ -0.33
PTPRU-205ENST00000460170 H3F3AP84243 136 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 FAM181AQ8N9Y4 354 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 PLPPR2Q96GM1 343 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 GPR37O15354 613 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 HEXAP06865 529 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 POLR2GP62487 172 aaKnown RBP eCLIP12.97□□□□□ -0.33
PTPRU-205ENST00000460170 TIGITQ495A1 244 aa12.97□□□□□ -0.33
PTPRU-205ENST00000460170 ZNF574Q6ZN55 896 aaPredicted RBP12.97□□□□□ -0.33
PTPRU-205ENST00000460170 APOBEC4Q8WW27 367 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms