RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 SPACA1Q9HBV2 294 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 HSF4Q9ULV5 492 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 PLEKHA6Q9Y2H5 1048 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 NUBP2Q9Y5Y2 271 aa7.63□□□□□ -1.19
VPS50-207ENST00000458530 PRRC2AP48634 2157 aaKnown RBP7.63□□□□□ -1.19
VPS50-207ENST00000458530 JMJD1CQ15652 2540 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 ABCA4P78363 2273 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 A0A1B0GVG6 124 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 MFNGO00587 321 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 LANCL1O43813 399 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 ANGPTL7O43827 346 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 DHFRP00374 187 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 IGHV3-13P01766 116 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 GABRR1P24046 479 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 MPZP25189 248 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 SLC6A1P30531 599 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 MPV17P39210 176 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 PMELP40967 661 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 RFX2P48378 723 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 BCAP31P51572 246 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 FGF12P61328 243 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 ERVS71-1P61550 626 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 NKX6-1P78426 367 aaPredicted RBP7.62□□□□□ -1.19
VPS50-207ENST00000458530 IL13RA2Q14627 380 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 MOGAT2Q3SYC2 334 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 RSBN1Q5VWQ0 802 aaPredicted RBP7.62□□□□□ -1.19
VPS50-207ENST00000458530 HAGHLQ6PII5 290 aaPredicted RBP7.62□□□□□ -1.19
VPS50-207ENST00000458530 CRIP3Q6Q6R5 217 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 NCCRP1Q6ZVX7 275 aaPredicted RBP7.62□□□□□ -1.19
VPS50-207ENST00000458530 C1QL2Q7Z5L3 287 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 Q8NFD4 153 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 OR10K1Q8NGX5 313 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 LILRB4Q8NHJ6 448 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 SEH1LQ96EE3 360 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 NICN1Q9BSH3 213 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 OR51I2Q9H344 312 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 ZNF442Q9H7R0 627 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 KCNJ16Q9NPI9 418 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 PLEKHJ1Q9NW61 149 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 NPAP1Q9NZP6 1156 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 KLK11Q9UBX7 282 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 GLS2Q9UI32 602 aa7.62□□□□□ -1.19
VPS50-207ENST00000458530 CHD3Q12873 2000 aaKnown RBP7.62□□□□□ -1.19
VPS50-207ENST00000458530 A0A1W2PP11 408 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 MEIOCA2RUB1 952 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 FAM90A27PA6NNH2 459 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 ZNF736B4DX44 427 aaPredicted RBP7.61□□□□□ -1.19
VPS50-207ENST00000458530 DISC1C4P0D8 188 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 ATP6V1G2-DDX39BF2Z307 99 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 SOCS1O15524 211 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 PDCD6O75340 191 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 RAB3DO95716 219 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 ACAA1P09110 424 aaPredicted RBP7.61□□□□□ -1.19
VPS50-207ENST00000458530 GNB3P16520 340 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 IGFBP2P18065 325 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 CD33P20138 364 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 FUT3P21217 361 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 TNFSF4P23510 183 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 SRP9P49458 86 aaKnown RBP7.61□□□□□ -1.19
VPS50-207ENST00000458530 FABP6P51161 128 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 RAG2P55895 527 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 TAS2R46P59540 309 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 BTG1P62324 171 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 RNASE10Q5GAN6 216 aaKnown RBP7.61□□□□□ -1.19
VPS50-207ENST00000458530 FAM76BQ5HYJ3 339 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 DMRTC1Q5HYR2 192 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 STEAP1BQ6NZ63 245 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 SLC22A25Q6T423 547 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 RNF144BQ7Z419 303 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 BIVMQ86UB2 503 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 CALHM1Q8IU99 346 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 FBXL14Q8N1E6 418 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 CELF2-AS1Q8N7Q2 184 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 GCDHQ92947 438 aaPredicted RBP7.61□□□□□ -1.19
VPS50-207ENST00000458530 SLAMF9Q96A28 289 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 ARHGAP5-AS1Q96IT6 56 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 DIRC2Q96SL1 478 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 CACNG6Q9BXT2 260 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 PECRQ9BY49 303 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 CHST6Q9GZX3 395 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 HRASLSQ9HDD0 168 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 DLL4Q9NR61 685 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 MCUBQ9NWR8 336 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 SCP2D1Q9UJQ7 156 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 POU2F3Q9UKI9 436 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 EDARQ9UNE0 448 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 ST3GAL6Q9Y274 331 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 PRR14LQ5THK1 2151 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 CSPG4Q6UVK1 2322 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 HCFC1P51610 2035 aa7.61□□□□□ -1.19
VPS50-207ENST00000458530 COL6A5A8TX70 2615 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 IGLV3-9A0A075B6K5 115 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 A0A0A6YYD4 124 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 IGKV1-12A0A0C4DH73 117 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 A0A1B0GWJ7 208 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 FUOMA2VDF0 154 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 A6NLC8 198 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 FOXI3A8MTJ6 420 aaPredicted RBP7.6□□□□□ -1.19
VPS50-207ENST00000458530 ABCD4O14678 606 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 OR7C1O76099 320 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms