RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 CMC1Q7Z7K0 106 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 DTX2Q86UW9 622 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 IFNEQ86WN2 208 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 TCTE3Q8IZS6 198 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 ZNF567Q8N184 647 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 ZADH2Q8N4Q0 377 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 MS4A15Q8N5U1 240 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 EID2Q8N6I1 236 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 C9orf106Q8NAJ2 232 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 ZNF485Q8NCK3 441 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 B3GALNT2Q8NCR0 500 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 OR11H4Q8NGC9 324 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 OR1B1Q8NGR6 318 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 OR4X1Q8NH49 305 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 GPR119Q8TDV5 335 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 DOK4Q8TEW6 326 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 LCN9Q8WX39 176 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 DCUN1D4Q92564 292 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 AURKBQ96GD4 344 aaPredicted RBP4.61□□□□□ -1.67
VPS41-209ENST00000457055 SMIM8Q96KF7 97 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 GPR82Q96P67 336 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 TP53RKQ96S44 253 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 AGPAT1Q99943 283 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 CABLES2Q9BTV7 478 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 CHIAQ9BZP6 476 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 OR51I1Q9H343 314 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 PRORYQ9H606 182 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 SAP30LQ9HAJ7 183 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 FGF20Q9NP95 211 aaPredicted RBP4.61□□□□□ -1.67
VPS41-209ENST00000457055 A4GALTQ9NPC4 353 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 HINT3Q9NQE9 182 aaKnown RBP4.61□□□□□ -1.67
VPS41-209ENST00000457055 SCN3BQ9NY72 215 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 TMEM216Q9P0N5 145 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 LAMP3Q9UQV4 416 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 TP53TG1Q9Y2A0 90 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 NSG2Q9Y328 171 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 PCYT1BQ9Y5K3 369 aaPredicted RBP4.61□□□□□ -1.67
VPS41-209ENST00000457055 TP53BP1Q12888 1972 aaPredicted RBP4.61□□□□□ -1.67
VPS41-209ENST00000457055 SMCHD1A6NHR9 2005 aa4.61□□□□□ -1.67
VPS41-209ENST00000457055 ZFHX2Q9C0A1 2572 aaPredicted RBP4.6□□□□□ -1.67
VPS41-209ENST00000457055 PLXNA3P51805 1871 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 MYH13Q9UKX3 1938 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 IGHV2-70DA0A0C4DH43 119 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 PNMA8CA0A1B0GUJ8 204 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 CASTOR2A6NHX0 329 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 G3V4G9 280 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 J3QR06 171 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 UBFD1O14562 309 aaKnown RBP4.6□□□□□ -1.67
VPS41-209ENST00000457055 TAAR5O14804 337 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 RGS16O15492 202 aaPredicted RBP4.6□□□□□ -1.67
VPS41-209ENST00000457055 FABP7O15540 132 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 MFSD11O43934 449 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 GLUD1P00367 558 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 MBPP02686 304 aaPredicted RBP4.6□□□□□ -1.67
VPS41-209ENST00000457055 CATP04040 527 aaKnown RBP4.6□□□□□ -1.67
VPS41-209ENST00000457055 CRYGDP07320 174 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 SNRPCP09234 159 aaKnown RBP4.6□□□□□ -1.67
VPS41-209ENST00000457055 PSG1P11464 419 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 HLA-EP13747 358 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 MYL12AP19105 171 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 APOBEC1P41238 236 aaKnown RBP4.6□□□□□ -1.67
VPS41-209ENST00000457055 ZFP36L2P47974 494 aaKnown RBP4.6□□□□□ -1.67
VPS41-209ENST00000457055 ZNF133P52736 654 aaPredicted RBP4.6□□□□□ -1.67
VPS41-209ENST00000457055 DEFA1P59665 94 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 DEFA3P59666 94 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 PITX1P78337 314 aaPredicted RBP4.6□□□□□ -1.67
VPS41-209ENST00000457055 MXD1Q05195 221 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 PIGFQ07326 219 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 GUSBP1Q15486 140 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 LCE1AQ5T7P2 110 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 HBMQ6B0K9 141 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 KIRREL2Q6UWL6 708 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 WDR82Q6UXN9 313 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 TMEM184AQ6ZMB5 413 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 C16orf82Q7Z2V1 217 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 CA13Q8N1Q1 262 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 BPIFB2Q8N4F0 458 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 FAM24BQ8N5W8 94 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 LRRC57Q8N9N7 239 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 Q8N9P0 234 aaPredicted RBP4.6□□□□□ -1.67
VPS41-209ENST00000457055 MDS2Q8NDY4 140 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 OR8G5Q8NG78 346 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 OR5K2Q8NHB8 316 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 XAGE5Q8WWM1 108 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 NDRG1Q92597 394 aaKnown RBP4.6□□□□□ -1.67
VPS41-209ENST00000457055 RDH5Q92781 318 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 FGGYQ96C11 551 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 LINC00052Q96N35 136 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 OXGR1Q96P68 337 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 NKX3-1Q99801 234 aaPredicted RBP4.6□□□□□ -1.67
VPS41-209ENST00000457055 PSMG3Q9BT73 122 aaPredicted RBP4.6□□□□□ -1.67
VPS41-209ENST00000457055 DOHHQ9BU89 302 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 C20orf85Q9H1P6 137 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 OR51J1Q9H342 316 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 RNF167Q9H6Y7 350 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 CISHQ9NSE2 258 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 MRPL16Q9NX20 251 aaKnown RBP4.6□□□□□ -1.67
VPS41-209ENST00000457055 FBXL2Q9UKC9 423 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 ERG28Q9UKR5 140 aa4.6□□□□□ -1.67
VPS41-209ENST00000457055 TPRP12270 2363 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms