RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 ADIRFQ15847 76 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 PRSS8Q16651 343 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 TPTE2P1Q5T6R2 138 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 SLC8B1Q6J4K2 584 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 PSRC1Q6PGN9 363 aaPredicted RBP7.54□□□□□ -1.2
LSM5-208ENST00000450169 KMT5CQ86Y97 462 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 STPG4Q8N801 248 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 OR52M1Q8NGK5 317 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 IL22RA2Q969J5 263 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 MOB3AQ96BX8 217 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 C8orf44Q96CB5 159 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 GNPNAT1Q96EK6 184 aaPredicted RBP7.54□□□□□ -1.2
LSM5-208ENST00000450169 CYYR1Q96J86 154 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 YPEL2Q96QA6 119 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 IMMP2LQ96T52 175 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 ABHD6Q9BV23 337 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 MMP25Q9NPA2 562 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.54□□□□□ -1.2
LSM5-208ENST00000450169 TMEM106BQ9NUM4 274 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 CISD1Q9NZ45 108 aaKnown RBP7.54□□□□□ -1.2
LSM5-208ENST00000450169 ZNF581Q9P0T4 197 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 PPIAL4AQ9Y536 164 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 TET1Q8NFU7 2136 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 MAP1LC3B2A6NCE7 125 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 H7BYZ3 331 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 SRSF10O75494 262 aaKnown RBP7.53□□□□□ -1.2
LSM5-208ENST00000450169 OR2J2O76002 312 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 TOMM40O96008 361 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 CTSDP07339 412 aaPredicted RBP7.53□□□□□ -1.2
LSM5-208ENST00000450169 CEBPBP17676 345 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 CST5P28325 142 aaPredicted RBP7.53□□□□□ -1.2
LSM5-208ENST00000450169 DUSP1P28562 367 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 SLC11A1P49279 550 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 RAB28P51157 221 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 NOGQ13253 232 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 FAM189A2Q15884 450 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 TCEAL5Q5H9L2 206 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 PARS2Q7L3T8 475 aaKnown RBP7.53□□□□□ -1.2
LSM5-208ENST00000450169 OR2C3Q8N628 320 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 CORO2AQ92828 525 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 REEP6Q96HR9 211 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 ARHGAP5-AS1Q96IT6 56 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 ADOQ96SZ5 270 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 MAP1LC3BQ9GZQ8 125 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 WWTR1Q9GZV5 400 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 ELL3Q9HB65 397 aaPredicted RBP7.53□□□□□ -1.2
LSM5-208ENST00000450169 RPH3ALQ9UNE2 315 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 TRAV1-1A0A0B4J248 108 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 A0A0U1RQV5 110 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 ANKUB1A6NFN9 424 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 ZNF732B4DXR9 585 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 P2RY10O00398 339 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 TNFRSF10CO14798 259 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 NKX2-2O95096 273 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 DDAH2O95865 285 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 HRASP01112 189 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 ASAH2BP0C7U1 165 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 OMGP23515 440 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 ZNF93P35789 620 aaPredicted RBP7.53□□□□□ -1.2
LSM5-208ENST00000450169 TMEM50BP56557 158 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 ZNF92Q03936 586 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 CLEC12BQ2HXU8 276 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 SP6Q3SY56 376 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 CST9LP1Q5W188 147 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 C16orf54Q6UWD8 224 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 DPPA3Q6W0C5 159 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 NUP54Q7Z3B4 507 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 LYZL2Q7Z4W2 148 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 TMEM256Q8N2U0 113 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 ARHGEF39Q8N4T4 335 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 CISD2Q8N5K1 135 aaKnown RBP7.53□□□□□ -1.2
LSM5-208ENST00000450169 OR52N5Q8NH56 324 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 TMEM171Q8WVE6 324 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 LIPHQ8WWY8 451 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 CAPNS2Q96L46 248 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 CSTL1Q9H114 145 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 G6PC2Q9NQR9 355 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 SCN3AQ9NY46 2000 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 OR6C3Q9NZP0 311 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 ZNF319Q9P2F9 582 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 OR1A2Q9Y585 309 aa7.53□□□□□ -1.2
LSM5-208ENST00000450169 FAM24AA6NFZ4 105 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 CSTAP01040 98 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 IGKV1D-16P01601 117 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 BGLAPP02818 100 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 UBE2NP61088 152 aaKnown RBP7.52□□□□□ -1.21
LSM5-208ENST00000450169 RUNX1Q01196 453 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 C9orf50Q5SZB4 431 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 CDCP2Q5VXM1 449 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 PLPP4Q5VZY2 271 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 GLIPR1L1Q6UWM5 242 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 LINC01551Q86U37 167 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 LGI3Q8N145 548 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 Q8NFD4 153 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 OR4C5Q8NGB2 326 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 OR2D3Q8NGH3 330 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 KCNG3Q8TAE7 436 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 KCNE4Q8WWG9 221 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 TMEM59Q9BXS4 323 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 BANF2Q9H503 90 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms