RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 THSD7AQ9UPZ6 1657 aa3.14□□□□□ -1.91
HMGB3P8-201ENST00000449709 CHD3Q12873 2000 aaKnown RBP3.14□□□□□ -1.91
HMGB3P8-201ENST00000449709 PIKFYVEQ9Y2I7 2098 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 TRAV25A0A0B4J276 109 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 A0A0J9YY10 115 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 CENPVL1A0A0U1RR11 272 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 A0A1B0GU03 582 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 A0A1B0GX78 115 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 IGSF23A1L1A6 192 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 TMEM213A2RRL7 107 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 A4D1N5 150 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 IGLON5A6NGN9 336 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 OR51F1A6NGY5 319 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 GLOD5A6NK44 160 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF705GA8MUZ8 300 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 SUPT3HB4E1H0 165 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF814B7Z6K7 855 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 F5H5T6 163 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 H3BQ15 152 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 M0R036 132 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 TAX1BP3O14907 124 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 ARPC3O15145 178 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF208O43345 1280 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 HCRTR1O43613 425 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 TLX3O43711 291 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 OR7C2O60412 319 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF354AO60765 605 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 RAD51DO75771 328 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 GLSO94925 669 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 TXNDC12O95881 172 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 HLA-DQA2P01906 255 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 REG1AP05451 166 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 CTSDP07339 412 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 DCNP07585 359 aaKnown RBP3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 SRP19P09132 144 aaKnown RBP3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 ALPPL2P10696 532 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 FCGR2AP12318 317 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 CEACAM1P13688 526 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 CTSEP14091 401 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 GOT1P17174 413 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 CELP19835 753 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 TCN2P20062 427 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 SAT1P21673 171 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 PRDX3P30048 256 aaKnown RBP3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 CMPK1P30085 196 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 DCTDP32321 178 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 GABRA3P34903 492 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 GPR12P47775 334 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 CSNK1A1P48729 337 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 ARRB1P49407 418 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 HTR6P50406 440 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 HMGCS2P54868 508 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 ATP5IP56385 69 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 CLDN15P56746 228 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 TAS2R43P59537 309 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 UBE2MP61081 183 aaKnown RBP3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 UBE2KP61086 200 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 YPEL5P62699 121 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 HERV-K104P63124 156 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 PAFAH1B2P68402 229 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 CYCSP99999 105 aaKnown RBP3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 ID2Q02363 134 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF92Q03936 586 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 BAXQ07812 192 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF154Q13106 437 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 NFATC2Q13469 925 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF235Q14590 738 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 PDGFRLQ15198 375 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 RNPS1Q15287 305 aaKnown RBP3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 MMDQ15546 238 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 HYAL4Q2M3T9 481 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZXDCQ2QGD7 858 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 ALG10Q5BKT4 473 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 PDZD11Q5EBL8 140 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 LRRC73Q5JTD7 316 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF506Q5JVG8 444 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 C9orf50Q5SZB4 431 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 SERTAD4-AS1Q5TG53 156 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 PWWP2BQ6NUJ5 590 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 ZNF343Q6P1L6 599 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 FOXI2Q6ZQN5 318 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 Q6ZRG5 221 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 BCDIN3DQ7Z5W3 292 aaKnown RBP3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 SLC25A42Q86VD7 318 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 C1orf174Q8IYL3 243 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 BOD1L2Q8IYS8 172 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 CMTM8Q8IZV2 173 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 MUC15Q8N387 334 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 LINC00471Q8N535 108 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 TCEANCQ8N8B7 351 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 FER1L6-AS1Q8NA97 138 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 GATSQ8NAP1 163 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 INO80EQ8NBZ0 244 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 CHST4Q8NCG5 386 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 OR5AU1Q8NGC0 362 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 OR4L1Q8NH43 312 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 OR5AK3PQ8NH89 298 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 UBTD2Q8WUN7 234 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 TNFAIP8L1Q8WVP5 186 aa3.13□□□□□ -1.91
HMGB3P8-201ENST00000449709 DNAJB3Q8WWF6 145 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms