RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 CHRM2P08172 466 aa13.54□□□□□ -0.24
SF3A1-204ENST00000447376 FSTP19883 344 aa13.54□□□□□ -0.24
SF3A1-204ENST00000447376 PDZK1IP1Q13113 114 aa13.54□□□□□ -0.24
SF3A1-204ENST00000447376 DOC2BQ14184 412 aa13.54□□□□□ -0.24
SF3A1-204ENST00000447376 DGUOKQ16854 277 aa13.54□□□□□ -0.24
SF3A1-204ENST00000447376 SAXO1Q8IYX7 474 aa13.54□□□□□ -0.24
SF3A1-204ENST00000447376 KIR3DL3Q8N743 410 aa13.54□□□□□ -0.24
SF3A1-204ENST00000447376 ASCC1Q8N9N2 400 aaKnown RBP13.54□□□□□ -0.24
SF3A1-204ENST00000447376 ZSCAN4Q8NAM6 433 aaPredicted RBP13.54□□□□□ -0.24
SF3A1-204ENST00000447376 DERL3Q96Q80 235 aa13.54□□□□□ -0.24
SF3A1-204ENST00000447376 RHOFQ9HBH0 211 aa13.54□□□□□ -0.24
SF3A1-204ENST00000447376 HES4Q9HCC6 221 aa13.54□□□□□ -0.24
SF3A1-204ENST00000447376 VCX3AQ9NNX9 186 aa13.54□□□□□ -0.24
SF3A1-204ENST00000447376 MTCH1Q9NZJ7 389 aa13.54□□□□□ -0.24
SF3A1-204ENST00000447376 ZNF222Q9UK12 451 aa13.54□□□□□ -0.24
SF3A1-204ENST00000447376 IGHV3OR16-10A0A075B7F0 116 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 hCG_1809904A0A1W2PP81 198 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 A0A1W2PPE2 198 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 A0A1W2PPK0 400 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 A0A1W2PR64 198 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 A0A1W2PRV1 198 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 MEGF11A6BM72 1044 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 TMEM225BP0DP42 221 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 SELLP14151 372 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 HILS1P60008 231 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 ERVK11-1P61568 191 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 SPIN3Q5JUX0 258 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 UBE2UQ5VVX9 321 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 CEACAM19Q7Z692 300 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 PHC2Q8IXK0 858 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 FAM58AQ8N1B3 248 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 C8orf46Q8TAG6 207 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 ZFAND2BQ8WV99 257 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 PHYHIPQ92561 330 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 TMEM203Q969S6 136 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 RFT1Q96AA3 541 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 SPACA5Q96QH8 159 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 FAM234AQ9H0X4 552 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 SLITRK2Q9H156 845 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 NOX4Q9NPH5 578 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 ZNF69Q9UC07 566 aa13.53□□□□□ -0.24
SF3A1-204ENST00000447376 MXRA5Q9NR99 2828 aa13.52□□□□□ -0.24
SF3A1-204ENST00000447376 SPRY1O43609 319 aaPredicted RBP13.52□□□□□ -0.25
SF3A1-204ENST00000447376 TFF1P04155 84 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 IGHV4-38-2P0DP08 117 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 PRKACAP17612 351 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 IGFBP3P17936 291 aaPredicted RBP13.52□□□□□ -0.25
SF3A1-204ENST00000447376 AMY2BP19961 511 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 PSMB9P28065 219 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 GABRA5P31644 462 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 ZNF93P35789 620 aaPredicted RBP13.52□□□□□ -0.25
SF3A1-204ENST00000447376 BMXP51813 675 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 KLF17Q5JT82 389 aaPredicted RBP13.52□□□□□ -0.25
SF3A1-204ENST00000447376 DDI2Q5TDH0 399 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 UNQ9370/PRO34162Q6UXP9 181 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 CDH26Q8IXH8 852 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 FAM185AQ8N0U4 392 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 CD177Q8N6Q3 437 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 LY6G5BQ8NDX9 201 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 OR52N4Q8NGI2 321 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 OR51A2Q8NGJ7 313 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 OR5D13Q8NGL4 314 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 PPP1R35Q8TAP8 253 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 S100A13Q99584 98 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 MDFIQ99750 246 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 ZMAT3Q9HA38 289 aaKnown RBP13.52□□□□□ -0.25
SF3A1-204ENST00000447376 TCF7L1Q9HCS4 588 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 MAB21L2Q9Y586 359 aa13.52□□□□□ -0.25
SF3A1-204ENST00000447376 A0A087WXM4 84 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 M0R1W7 72 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 CCRL2O00421 344 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 ARL6IP5O75915 188 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 SFTPBP07988 381 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 CEBPDP49716 269 aaPredicted RBP13.51□□□□□ -0.25
SF3A1-204ENST00000447376 RPL31P62899 125 aaKnown RBP13.51□□□□□ -0.25
SF3A1-204ENST00000447376 GUCA2AQ02747 115 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 HSD17B12Q53GQ0 312 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 ASPHD2Q6ICH7 369 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 C9orf139Q6ZV77 190 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 GDPD3Q7L5L3 318 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 VMO1Q7Z5L0 202 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 FGFRL1Q8N441 504 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 NKAIN3Q8N8D7 197 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 TSPAN14Q8NG11 270 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 OR5D18Q8NGL1 313 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 TNFAIP8L1Q8WVP5 186 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 LHX4Q969G2 390 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 ZDHHC16Q969W1 377 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 FAM192AQ9GZU8 254 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 SIRPDQ9H106 197 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 PCDHB16Q9NRJ7 776 aa13.51□□□□□ -0.25
SF3A1-204ENST00000447376 ATRQ13535 2644 aa13.5□□□□□ -0.25
SF3A1-204ENST00000447376 CUBNO60494 3623 aa13.5□□□□□ -0.25
SF3A1-204ENST00000447376 TRAV8-7A0A075B6U6 113 aa13.5□□□□□ -0.25
SF3A1-204ENST00000447376 SH2D1BO14796 132 aa13.5□□□□□ -0.25
SF3A1-204ENST00000447376 HAND1O96004 215 aa13.5□□□□□ -0.25
SF3A1-204ENST00000447376 TK1P04183 234 aa13.5□□□□□ -0.25
SF3A1-204ENST00000447376 MAS1P04201 325 aa13.5□□□□□ -0.25
SF3A1-204ENST00000447376 MMP9P14780 707 aa13.5□□□□□ -0.25
SF3A1-204ENST00000447376 BCL3P20749 454 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms