RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 RPS4Y2Q8TD47 263 aa9.2□□□□□ -0.94
CALD1-210ENST00000443197 GMPPAQ96IJ6 420 aaPredicted RBP9.2□□□□□ -0.94
CALD1-210ENST00000443197 ARPC5LQ9BPX5 153 aa9.2□□□□□ -0.94
CALD1-210ENST00000443197 U3KQ87 197 aa9.2□□□□□ -0.94
CALD1-210ENST00000443197 KIAA2026Q5HYC2 2103 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 C3orf80F5H4A9 247 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 PTAFRP25105 342 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 NPBWR2P48146 333 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 TNFSF10P50591 281 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 LPCAT3Q6P1A2 487 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 ERRFI1Q9UJM3 462 aaPredicted RBP9.19□□□□□ -0.94
CALD1-210ENST00000443197 EDARQ9UNE0 448 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 MUC22E2RYF6 1773 aaPredicted RBP9.19□□□□□ -0.94
CALD1-210ENST00000443197 NDUFB7P17568 137 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 EIF2S3P41091 472 aaKnown RBP9.19□□□□□ -0.94
CALD1-210ENST00000443197 ASCL1P50553 236 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 FAM3AP98173 230 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 MZT1Q08AG7 82 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 H1FXQ92522 213 aaKnown RBP9.19□□□□□ -0.94
CALD1-210ENST00000443197 ANKRD34BA5PLL1 514 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 DEFB108AA8MXU0 73 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 H3BP45 60 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 MED6O75586 246 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 SELEP16581 610 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 LHX2P50458 406 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 ZDHHC22Q8N966 263 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 SOSTQ9BQB4 213 aa9.19□□□□□ -0.94
CALD1-210ENST00000443197 CACNA1BQ00975 2339 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 ZNF716A6NP11 495 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 TERTO14746 1132 aaKnown RBP9.18□□□□□ -0.94
CALD1-210ENST00000443197 TSPAN15O95858 294 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 FPR2P25090 351 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 AKR1D1P51857 326 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 LGALSLQ3ZCW2 172 aaPredicted RBP9.18□□□□□ -0.94
CALD1-210ENST00000443197 SHEQ5VZ18 495 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 CLEC18BQ6UXF7 455 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 ACOT7LQ6ZUV0 252 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 GGNQ86UU5 652 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 CPEB3Q8NE35 698 aaKnown RBP9.18□□□□□ -0.94
CALD1-210ENST00000443197 GPHA2Q96T91 129 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 SYNGR1O43759 233 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 ZBTB37Q5TC79 503 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 CLEC9AQ6UXN8 241 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 SULT4A1Q9BR01 284 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 DECR2Q9NUI1 292 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 OPN4Q9UHM6 478 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 IFNA17P01571 189 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 CLDN18P56856 261 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 UBA52P62987 128 aaKnown RBP9.18□□□□□ -0.94
CALD1-210ENST00000443197 SSX9Q7RTT3 188 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 ZNF610Q8N9Z0 462 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 OR11H4Q8NGC9 324 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 OR10V1Q8NGI7 309 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 ENY2Q9NPA8 101 aa9.18□□□□□ -0.94
CALD1-210ENST00000443197 IGKV1-9A0A0C4DH69 117 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 F8W036 122 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 ST8SIA3O43173 380 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 OR5AC1P0C628 307 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 ZNF708P17019 499 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 BLOC1S1P78537 153 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 RAB32Q13637 225 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 C11orf87Q6NUJ2 197 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 STX12Q86Y82 276 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 C9orf62Q8N4C0 152 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 LRRC46Q96FV0 321 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 MED30Q96HR3 178 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 TECTBQ96PL2 329 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 PARD6AQ9NPB6 346 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 ZFP57Q9NU63 452 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 IGHV3-43A0A0B4J1X8 118 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 CEBPZOSA8MTT3 80 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 SYNGR3O43761 229 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 IGHV3-43DP0DP04 118 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 NKX2-1P43699 371 aaPredicted RBP9.17□□□□□ -0.94
CALD1-210ENST00000443197 H3F3AP84243 136 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 IGFBP7Q16270 282 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 PLAC9Q5JTB6 97 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 GPR157Q5UAW9 335 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 VWA1Q6PCB0 445 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 ZNF826PQ6ZT77 177 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 TPRX1Q8N7U7 411 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 ZNF709Q8N972 641 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 DMBX1Q8NFW5 382 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 TCTEX1D2Q8WW35 142 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 SUCNR1Q9BXA5 334 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 DUS4LO95620 317 aaKnown RBP9.17□□□□□ -0.94
CALD1-210ENST00000443197 ECI1P42126 302 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 PRAMEF6Q5VXH4 476 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 SPAG16Q8N0X2 631 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 SPICQ8N5J4 248 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 OR11L1Q8NGX0 322 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 PTX4Q96A99 478 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 C10orf35Q96D05 121 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 C2orf50Q96LR7 162 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 MPC1Q9Y5U8 109 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 FREM1Q5H8C1 2179 aa9.17□□□□□ -0.94
CALD1-210ENST00000443197 RFPL4AA6NLU0 287 aa9.16□□□□□ -0.94
CALD1-210ENST00000443197 TMEM14DPA8MWL7 114 aa9.16□□□□□ -0.94
CALD1-210ENST00000443197 RFPL4AL1F8VTS6 287 aa9.16□□□□□ -0.94
CALD1-210ENST00000443197 SPINT2O43291 252 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms