RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ACSM1Q08AH1 577 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 ZNF146Q15072 292 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 KISS1Q15726 138 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 AHSA2Q719I0 299 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 SATL1Q86VE3 508 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 PDZD9Q8IXQ8 264 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 OR8H2Q8N162 312 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 C3orf56Q8N813 242 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 OR4M1Q8NGD0 313 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 THRSPQ92748 146 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 MYDGFQ969H8 173 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 RFT1Q96AA3 541 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 SMIM19Q96E16 107 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 DUX5Q96PT3 197 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 S100A13Q99584 98 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 DPAGT1Q9H3H5 408 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 UNKLQ9H9P5 680 aaKnown RBP8.6□□□□□ -1.03
MCF2L-216ENST00000439475 ELL3Q9HB65 397 aaPredicted RBP8.6□□□□□ -1.03
MCF2L-216ENST00000439475 HMG20AQ9NP66 347 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 EXOSC4Q9NPD3 245 aaKnown RBP8.6□□□□□ -1.03
MCF2L-216ENST00000439475 PCDHB16Q9NRJ7 776 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 C19orf12Q9NSK7 152 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 CLEC2DQ9UHP7 191 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 PSORS1C1Q9UIG5 152 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 GSTK1Q9Y2Q3 226 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 POMT1Q9Y6A1 747 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 hADV38S2A0JD32 116 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 MGST3O14880 152 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 NPFFO15130 113 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 HOXA3O43365 443 aaPredicted RBP8.59□□□□□ -1.03
MCF2L-216ENST00000439475 ANGPTL7O43827 346 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 XPNPEP2O43895 674 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 KDM4BO94953 1096 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 PAHP00439 452 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 ALDOBP05062 364 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 GNAO1P09471 354 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 ZNF44P15621 663 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 GABRR1P24046 479 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 NPBWR2P48146 333 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 MTNR1BP49286 362 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 COMPP49747 757 aaPredicted RBP8.59□□□□□ -1.03
MCF2L-216ENST00000439475 LGALS4P56470 323 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 WNT4P56705 351 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 MEF2CQ06413 473 aaPredicted RBP8.59□□□□□ -1.03
MCF2L-216ENST00000439475 SLC9A3R2Q15599 337 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 GRK1Q15835 563 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 YIF1BQ5BJH7 314 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 C6orf141Q5SZD1 244 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 TMEM200BQ69YZ2 307 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 Q8N7P7 452 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 PXT1Q8NFP0 134 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 OR5D18Q8NGL1 313 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 RPS4Y2Q8TD47 263 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 FBLIM1Q8WUP2 373 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 SSMEM1Q8WWF3 244 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 TMEM106AQ96A25 262 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 SPACA5Q96QH8 159 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 TMEM138Q9NPI0 162 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 RBFOX1Q9NWB1 397 aaKnown RBP8.59□□□□□ -1.03
MCF2L-216ENST00000439475 CKLFQ9UBR5 152 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 NKX1-2Q9UD57 310 aaPredicted RBP8.59□□□□□ -1.03
MCF2L-216ENST00000439475 TPRKBQ9Y3C4 175 aa8.59□□□□□ -1.03
MCF2L-216ENST00000439475 SOX21Q9Y651 276 aaPredicted RBP8.59□□□□□ -1.03
MCF2L-216ENST00000439475 MDFIC2A0A1B0GVS7 189 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 MEIOCA2RUB1 952 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 PTGES3LE9PB15 166 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 F8VVB4 439 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 F8VWA3 439 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 RNASEK-C17orf49H0YIS7 233 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 DEGS1O15121 323 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 ZNF737O75373 536 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 MELTFP08582 738 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 LMO1P25800 156 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 DUSP1P28562 367 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 BDKRB2P30411 391 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 SNU13P55769 128 aaKnown RBP8.58□□□□□ -1.04
MCF2L-216ENST00000439475 RPL15P61313 204 aaKnown RBP8.58□□□□□ -1.04
MCF2L-216ENST00000439475 SCN1BQ07699 218 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 Q499Y3 187 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 DMKNQ6E0U4 476 aaPredicted RBP8.58□□□□□ -1.04
MCF2L-216ENST00000439475 XAF1Q6GPH4 301 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 LDLRAD3Q86YD5 345 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 NANOGP1Q8N7R0 232 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 OR13D1Q8NGV5 346 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 GHSRQ92847 366 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 TNFRSF14Q92956 283 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 TNFRSF19Q9NS68 423 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 PAK1IP1Q9NWT1 392 aaPredicted RBP8.58□□□□□ -1.04
MCF2L-216ENST00000439475 TAS2R4Q9NYW5 299 aa8.58□□□□□ -1.04
MCF2L-216ENST00000439475 IGKV1-12A0A0C4DH73 117 aa8.57□□□□□ -1.04
MCF2L-216ENST00000439475 A0A0U1RQK1 487 aa8.57□□□□□ -1.04
MCF2L-216ENST00000439475 A0A1B0GUS0 222 aa8.57□□□□□ -1.04
MCF2L-216ENST00000439475 A0A1W2PRD5 423 aa8.57□□□□□ -1.04
MCF2L-216ENST00000439475 A0A1W2PRF3 423 aa8.57□□□□□ -1.04
MCF2L-216ENST00000439475 A0A1W2PRM7 423 aa8.57□□□□□ -1.04
MCF2L-216ENST00000439475 TMEM82A0PJX8 343 aa8.57□□□□□ -1.04
MCF2L-216ENST00000439475 ZNF780AO75290 641 aaPredicted RBP8.57□□□□□ -1.04
MCF2L-216ENST00000439475 IGKV1D-12P01611 117 aa8.57□□□□□ -1.04
MCF2L-216ENST00000439475 RBP4P02753 201 aa8.57□□□□□ -1.04
MCF2L-216ENST00000439475 CSTBP04080 98 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms