RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 OR13H1Q8NG92 308 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 TMEM171Q8WVE6 324 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 ADIPOR1Q96A54 375 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 NDUFAF3Q9BU61 184 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 PITPNC1Q9UKF7 332 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 RPL36A-HNRNPH2H7BZ11 118 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 SPRY1O43609 319 aaPredicted RBP10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 TNFP01375 233 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 HNRNPA2B1P22626 353 aaKnown RBP10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 HNF4GQ14541 408 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 JOSD1Q15040 202 aaPredicted RBP10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 C9orf40Q8IXQ3 194 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 OR13D1Q8NGV5 346 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 BOD1Q96IK1 185 aa10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 RPP25Q9BUL9 199 aaKnown RBP10.09□□□□□ -0.79
HMGCS1-202ENST00000433297 H3BP45 60 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 HLA-HP01893 362 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 AMBPP02760 352 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 THEGLP0DJG4 465 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 NKX2-1P43699 371 aaPredicted RBP10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 DYNLT3P51808 116 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 FGF8P55075 233 aaPredicted RBP10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 LANCL3Q6ZV70 420 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 C5orf24Q7Z6I8 188 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 FAM89BQ8N5H3 189 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 NKX2-4Q9H2Z4 354 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 SMDT1Q9H4I9 107 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 CBLN4Q9NTU7 201 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 NECAP2Q9NVZ3 263 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 TNFRSF9Q07011 255 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 SLC10A1Q14973 349 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 LBHQ53QV2 105 aaPredicted RBP10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 CXorf66Q5JRM2 361 aaPredicted RBP10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 DOK3Q7L591 496 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 C8orf33Q9H7E9 229 aaPredicted RBP10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 IGHV3-20A0A0C4DH32 117 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 XKRY2A2RUG3 117 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 IGHMP01871 453 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 ECI1P42126 302 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 CD81P60033 236 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 MRPL41Q8IXM3 137 aaKnown RBP10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 OR4X1Q8NH49 305 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 OR5R1Q8NH85 324 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 TMEM37Q8WXS4 190 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 SYT3Q9BQG1 590 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 CHST11Q9NPF2 352 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 PIGLQ9Y2B2 252 aa10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 UBE2J1Q9Y385 318 aaPredicted RBP10.08□□□□□ -0.8
HMGCS1-202ENST00000433297 MBP02144 154 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 HSPB1P04792 205 aaKnown RBP10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 CD55P08174 381 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 EPHA1P21709 976 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 NTSR1P30989 418 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 IDH3GP51553 393 aaPredicted RBP10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 LBX1P52954 281 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 MTCP1P56278 107 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 ERVS71-1P61550 626 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 ZNF154Q13106 437 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 CLN3Q13286 438 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 SLC35E3Q7Z769 313 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 THNSL2Q86YJ6 484 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 ZNF721Q8TF20 911 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 TP53RKQ96S44 253 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 ZNF160Q9HCG1 818 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 SERINC1Q9NRX5 453 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 COPS7AQ9UBW8 275 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 A0A1B0GW64 132 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 ZNF43P17038 809 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 LMO1P25800 156 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 H3F3AP84243 136 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 COL10A1Q03692 680 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 TLE4Q04727 773 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 ADIRFQ15847 76 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 ZNF66Q6ZN08 573 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 TMEM252Q8N6L7 170 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 CLDND2Q8NHS1 167 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 TMEM234Q8WY98 164 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 HIST1H2AAQ96QV6 131 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 WWTR1Q9GZV5 400 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 CALHM2Q9HA72 323 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 CERS4Q9HA82 394 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 GPR173Q9NS66 373 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 IL17BQ9UHF5 180 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 LAMP3Q9UQV4 416 aa10.07□□□□□ -0.8
HMGCS1-202ENST00000433297 DDAH2O95865 285 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 PNLIPP16233 465 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 RAB4BP61018 213 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 MRPS34P82930 218 aaKnown RBP10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 ARL6IP1Q15041 203 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 ZNF695Q8IW36 515 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 TMEM183AQ8IXX5 376 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 RAB24Q969Q5 203 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 DKKL1Q9UK85 242 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 SHANK1Q9Y566 2161 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 A0A1B0GWJ7 208 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 A0A1W2PNR3 127 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 SHISA7A6NL88 538 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 DFFBO76075 338 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 SCGB1D1O95968 90 aa10.06□□□□□ -0.8
HMGCS1-202ENST00000433297 OR4A8P0C604 315 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms