RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 G3V3Q6 166 aa14.26□□□□□ -0.13
USHBP1-203ENST00000431146 AKR1C4P17516 323 aa14.26□□□□□ -0.13
USHBP1-203ENST00000431146 DUSP1P28562 367 aa14.26□□□□□ -0.13
USHBP1-203ENST00000431146 H2BFSP57053 126 aa14.26□□□□□ -0.13
USHBP1-203ENST00000431146 CHRFAM7AQ494W8 412 aa14.26□□□□□ -0.13
USHBP1-203ENST00000431146 ZNF324BQ6AW86 544 aaPredicted RBP14.26□□□□□ -0.13
USHBP1-203ENST00000431146 BEND4Q6ZU67 534 aa14.26□□□□□ -0.13
USHBP1-203ENST00000431146 OR13G1Q8NGZ3 307 aa14.26□□□□□ -0.13
USHBP1-203ENST00000431146 TERB2Q8NHR7 220 aa14.26□□□□□ -0.13
USHBP1-203ENST00000431146 FAM57AQ8TBR7 257 aa14.26□□□□□ -0.13
USHBP1-203ENST00000431146 CADP27708 2225 aa14.25□□□□□ -0.13
USHBP1-203ENST00000431146 PCNX1Q96RV3 2341 aa14.25□□□□□ -0.13
USHBP1-203ENST00000431146 RRP8O43159 456 aaKnown RBP14.25□□□□□ -0.13
USHBP1-203ENST00000431146 HLA-AP01891 365 aaKnown RBP14.25□□□□□ -0.13
USHBP1-203ENST00000431146 PI3P19957 117 aa14.25□□□□□ -0.13
USHBP1-203ENST00000431146 DNASE1P24855 282 aa14.25□□□□□ -0.13
USHBP1-203ENST00000431146 PSG7Q13046 419 aa14.25□□□□□ -0.13
USHBP1-203ENST00000431146 PPP1R1AQ13522 171 aa14.25□□□□□ -0.13
USHBP1-203ENST00000431146 ZMYND11Q15326 602 aa14.25□□□□□ -0.13
USHBP1-203ENST00000431146 PRR30Q53SZ7 412 aaPredicted RBP14.25□□□□□ -0.13
USHBP1-203ENST00000431146 ACTBL2Q562R1 376 aa14.25□□□□□ -0.13
USHBP1-203ENST00000431146 DCAF12L2Q5VW00 463 aa14.25□□□□□ -0.13
USHBP1-203ENST00000431146 OR5AP2Q8NGF4 316 aa14.25□□□□□ -0.13
USHBP1-203ENST00000431146 LHFPL5Q8TAF8 219 aa14.25□□□□□ -0.13
USHBP1-203ENST00000431146 RANBP3Q9H6Z4 567 aaPredicted RBP14.25□□□□□ -0.13
USHBP1-203ENST00000431146 PCDHB16Q9NRJ7 776 aa14.25□□□□□ -0.13
USHBP1-203ENST00000431146 TRAPPC2LH3BP13 241 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 PDCD6O75340 191 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 CA11O75493 328 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 RHBDL1O75783 438 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 ZNF205O95201 554 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 TAS2R46P59540 309 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 GNG3P63215 75 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 P2RY6Q15077 328 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 SLC25A42Q86VD7 318 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 C9orf62Q8N4C0 152 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 C17orf78Q8N4C9 275 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 ARRDC1Q8N5I2 433 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 ZDHHC22Q8N966 263 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 KLF14Q8TD94 323 aaPredicted RBP14.24□□□□□ -0.13
USHBP1-203ENST00000431146 PPA2Q9H2U2 334 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 SLA2Q9H6Q3 261 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 ZNF442Q9H7R0 627 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 SH3BGRL2Q9UJC5 107 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 RAXQ9Y2V3 346 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 IGHV1-18A0A0C4DH31 117 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 OR5H1A6NKK0 313 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 HSPB6O14558 160 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 FCGR3AP08637 254 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 ZNF35P13682 527 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 SELEP16581 610 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 TDGF1P3P51864 188 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 LIN54Q6MZP7 749 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 C11orf88Q6PI97 169 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 OVCH2Q7RTZ1 564 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 WDR86Q86TI4 376 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 MKXQ8IYA7 352 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 C12orf45Q8N5I9 185 aaPredicted RBP14.24□□□□□ -0.13
USHBP1-203ENST00000431146 BOD1Q96IK1 185 aa14.24□□□□□ -0.13
USHBP1-203ENST00000431146 H0YL77 283 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 J3QW42 95 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 FUT3P21217 361 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 VAMP1P23763 118 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 CALCRP30988 508 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 TIMP3P35625 211 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 FGF12P61328 243 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 S100A12P80511 92 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 PPA1Q15181 289 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 IGSF11Q5DX21 431 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 AADACL3Q5VUY0 350 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 Q6ZPA2 131 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 S100PBPQ96BU1 408 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 TINAGQ9UJW2 476 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 OR5B21A6NL26 309 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 H3BUI4 141 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 SLC22A5O76082 557 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 RAC2P15153 192 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 BMP5P22003 454 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 PTGER4P35408 488 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 GMFBP60983 142 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 TMEM200AQ86VY9 491 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 ZNF573Q86YE8 665 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 SAXO1Q8IYX7 474 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 Q8NFD4 153 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 CASTOR1Q8WTX7 329 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 MARS2Q96GW9 593 aaKnown RBP14.23□□□□□ -0.13
USHBP1-203ENST00000431146 MICU1Q9BPX6 476 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 ADAT1Q9BUB4 502 aaKnown RBP14.23□□□□□ -0.13
USHBP1-203ENST00000431146 TRAF4Q9BUZ4 470 aaPredicted RBP14.23□□□□□ -0.13
USHBP1-203ENST00000431146 TMPRSS13Q9BYE2 586 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 OR51I2Q9H344 312 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 MYOZ1Q9NP98 299 aaPredicted RBP14.23□□□□□ -0.13
USHBP1-203ENST00000431146 ANXA10Q9UJ72 324 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 NOP16Q9Y3C1 178 aaKnown RBP14.23□□□□□ -0.13
USHBP1-203ENST00000431146 SLC25A15Q9Y619 301 aa14.23□□□□□ -0.13
USHBP1-203ENST00000431146 OR5H14A6NHG9 310 aa14.22□□□□□ -0.13
USHBP1-203ENST00000431146 OR2A4O95047 310 aa14.22□□□□□ -0.13
USHBP1-203ENST00000431146 CRHP06850 196 aa14.22□□□□□ -0.13
USHBP1-203ENST00000431146 GIPP09681 153 aaPredicted RBP14.22□□□□□ -0.13
USHBP1-203ENST00000431146 GLI4P10075 376 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms