RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 TMEM170AQ8WVE7 144 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 PP6455Q8WZ26 134 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 BTF3L4Q96K17 158 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 SEMA5BQ9P283 1151 aa4.49□□□□□ -1.69
RIF1-203ENST00000428287 IGKV1-9A0A0C4DH69 117 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 A0A1B0GVT2 93 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 PROB1E7EW31 1015 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 SFTPDP35247 375 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 CCR2P41597 374 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 NOVA1P51513 510 aaKnown RBP4.48□□□□□ -1.69
RIF1-203ENST00000428287 MESP2Q0VG99 397 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 NMSQ5H8A3 153 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 OR2I1PQ8NGU4 316 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 OR5H2Q8NGV7 314 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 LRRC3BQ96PB8 259 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 TSPAN32Q96QS1 320 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 PSMG3Q9BT73 122 aaPredicted RBP4.48□□□□□ -1.69
RIF1-203ENST00000428287 URM1Q9BTM9 101 aaKnown RBP4.48□□□□□ -1.69
RIF1-203ENST00000428287 SLC25A31Q9H0C2 315 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 OPN3Q9H1Y3 402 aaPredicted RBP4.48□□□□□ -1.69
RIF1-203ENST00000428287 PRO1933Q9H354 126 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 PLSCR2Q9NRY7 297 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 TMEM74BQ9NUR3 256 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 URGCP-MRPS24S4R325 110 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 NPIPA5A0A0B4J1W7 369 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 NPIPA7E9PJI5 369 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 PPBPP02775 128 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 NPIPA8P0DM63 369 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 VDAC1P21796 283 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 TAS2R30P59541 319 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 ACKR1Q16570 336 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 TEX38Q6PEX7 206 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 TEX43Q6ZNM6 134 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 SULF2Q8IWU5 870 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 TMEM252Q8N6L7 170 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 OR10S1Q8NGN2 331 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 FAM213BQ8TBF2 198 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 TSEN15Q8WW01 171 aaKnown RBP4.48□□□□□ -1.69
RIF1-203ENST00000428287 RBKSQ9H477 322 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 CRLF2Q9HC73 371 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 GPR137BO60478 399 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 TNFSF13O75888 250 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 IFNA21P01568 189 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 SNRPCP09234 159 aaKnown RBP4.48□□□□□ -1.69
RIF1-203ENST00000428287 BCKDHBP21953 392 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 RPL27P61353 136 aaKnown RBP4.48□□□□□ -1.69
RIF1-203ENST00000428287 RAC1P63000 192 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 AGBL4Q5VU57 503 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 ZNF283Q8N7M2 679 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 ARHGAP5-AS1Q96IT6 56 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 SH3BGRL3Q9H299 93 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 GAL3ST2Q9H3Q3 398 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 WFDC1Q9HC57 220 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 OR6C3Q9NZP0 311 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 PADI1Q9ULC6 663 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 ALG1L2C9J202 215 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 HPRT1P00492 218 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 IGKV3-11P04433 115 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 CCR4P51679 360 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 ACOT6Q3I5F7 207 aaPredicted RBP4.48□□□□□ -1.69
RIF1-203ENST00000428287 NKAIN1Q4KMZ8 207 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 TANGO2Q6ICL3 276 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 MTSS1LQ765P7 747 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 GALNTL5Q7Z4T8 443 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 OR4N5Q8IXE1 308 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 FAM160A2Q8N612 972 aaPredicted RBP4.48□□□□□ -1.69
RIF1-203ENST00000428287 PLPP5Q8NEB5 264 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 VWCEQ96DN2 955 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 NKX3-1Q99801 234 aaPredicted RBP4.48□□□□□ -1.69
RIF1-203ENST00000428287 FAM208BQ5VWN6 2430 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 PIGBOS1A0A0B4J2F0 54 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 A0A0U1RQV5 110 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 FAM230AA0A1W2PPH8 454 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 IL6RP08887 468 aaPredicted RBP4.48□□□□□ -1.69
RIF1-203ENST00000428287 GNB3P16520 340 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 GRPRP30550 384 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 OR3A2P47893 321 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 SLC6A8P48029 635 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 CAMLGP49069 296 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 HYAL4Q2M3T9 481 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 LRRC69Q6ZNQ3 347 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 MRGPRGQ86SM5 289 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 LSRQ86X29 649 aaPredicted RBP4.48□□□□□ -1.69
RIF1-203ENST00000428287 ABHD14AQ9BUJ0 271 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 CHRNA10Q9GZZ6 450 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 LRIT1Q9P2V4 623 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 OR6C6A6NF89 314 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 C4orf47A7E2U8 309 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 KIAA1324LA8MWY0 1029 aaPredicted RBP4.48□□□□□ -1.69
RIF1-203ENST00000428287 C10orf142B7Z368 130 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 F6UZH7 168 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 CYB5BO43169 146 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 SELPP16109 830 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 GNB2P62879 340 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 MEF2BQ02080 365 aaPredicted RBP4.48□□□□□ -1.69
RIF1-203ENST00000428287 ZP4Q12836 540 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 ELSPBP1Q96BH3 223 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 C10orf35Q96D05 121 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 TMEM106BQ9NUM4 274 aa4.48□□□□□ -1.69
RIF1-203ENST00000428287 GSKIPQ9P0R6 139 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms