RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 KCNE5Q9UJ90 142 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 RFPL4AA6NLU0 287 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 RFPL4AL1F8VTS6 287 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 MSTNO14793 375 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 PI3P19957 117 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 ALDH3B1P43353 468 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 TLE4Q04727 773 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 KLF9Q13886 244 aaPredicted RBP9.35□□□□□ -0.91
TCOF1-204ENST00000427724 GNMTQ14749 295 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 ZNF626Q68DY1 528 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 SGPP2Q8IWX5 399 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 ZNF561Q8N587 486 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 OR10AD1Q8NGE0 317 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 OR6K3Q8NGY3 331 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 IMMP1LQ96LU5 166 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 SPACA1Q9HBV2 294 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 PRSS50Q9UI38 385 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 MRM2Q9UI43 246 aaKnown RBP9.35□□□□□ -0.91
TCOF1-204ENST00000427724 NAV2Q8IVL1 2488 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 NLRC5Q86WI3 1866 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 DCTN6O00399 190 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 SH2D1BO14796 132 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 PPP1R2P9O14990 202 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 TNFSF12O43508 249 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 ZIC2O95409 532 aaPredicted RBP9.35□□□□□ -0.91
TCOF1-204ENST00000427724 RPA2P15927 270 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 SPICQ8N5J4 248 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 KCNG3Q8TAE7 436 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 FAM57AQ8TBR7 257 aa9.35□□□□□ -0.91
TCOF1-204ENST00000427724 HIVEP3Q5T1R4 2406 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 PLPP3O14495 311 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 BCL2L11O43521 198 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 MPZL1O95297 269 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 TAS2R31P59538 309 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 NANOS3P60323 173 aaKnown RBP9.34□□□□□ -0.91
TCOF1-204ENST00000427724 EGR3Q06889 387 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 ACTBL2Q562R1 376 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 ISOC2Q96AB3 205 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 AKR1E2Q96JD6 320 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 CCL19Q99731 98 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 MTFP1Q9UDX5 166 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 RAB27BO00194 218 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 IL5P05113 134 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 CAV2P51636 162 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 GPM6AP51674 278 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 SMIM21Q3B7S5 101 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 PUSL1Q8N0Z8 303 aaKnown RBP9.34□□□□□ -0.91
TCOF1-204ENST00000427724 C22orf15Q8WYQ4 148 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 PGLYRP3Q96LB9 341 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 KIF26BQ2KJY2 2108 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 TRAV8-7A0A075B6U6 113 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 ANKRD20A5PA0PJZ0 165 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 C17orf51A8MQB3 221 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 SLC17A2O00624 439 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 CLDN14O95500 239 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 BPNT1O95861 308 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 IGKV1D-16P01601 117 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 HLA-DQB1P01920 261 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 PTGFRP43088 359 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 NHLRC3Q5JS37 347 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 SOHLH1Q5JUK2 328 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 NCMAPQ5T1S8 102 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 HIST2H3AQ71DI3 136 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 NR2C2APQ86WQ0 139 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 OR4D6Q8NGJ1 314 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 OR51A4Q8NGJ6 313 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 MS4A3Q96HJ5 214 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 C4orf45Q96LM5 186 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 SFXN3Q9BWM7 321 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 RHOFQ9HBH0 211 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 GPR35Q9HC97 309 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 MYOZ1Q9NP98 299 aaPredicted RBP9.34□□□□□ -0.91
TCOF1-204ENST00000427724 EXOSC3Q9NQT5 275 aaKnown RBP9.34□□□□□ -0.91
TCOF1-204ENST00000427724 FRRS1LQ9P0K9 344 aa9.34□□□□□ -0.91
TCOF1-204ENST00000427724 CYB5BO43169 146 aa9.34□□□□□ -0.92
TCOF1-204ENST00000427724 UPK3AO75631 287 aa9.34□□□□□ -0.92
TCOF1-204ENST00000427724 CTLA4P16410 223 aa9.34□□□□□ -0.92
TCOF1-204ENST00000427724 F2RL1P55085 397 aa9.34□□□□□ -0.92
TCOF1-204ENST00000427724 SKP2Q13309 424 aa9.34□□□□□ -0.92
TCOF1-204ENST00000427724 MDP1Q86V88 176 aa9.34□□□□□ -0.92
TCOF1-204ENST00000427724 OR56B1Q8NGI3 324 aa9.34□□□□□ -0.92
TCOF1-204ENST00000427724 OTOSQ8NHW6 89 aa9.34□□□□□ -0.92
TCOF1-204ENST00000427724 TOLLIPQ9H0E2 274 aa9.34□□□□□ -0.92
TCOF1-204ENST00000427724 SHARPINQ9H0F6 387 aa9.34□□□□□ -0.92
TCOF1-204ENST00000427724 BARX1Q9HBU1 254 aaPredicted RBP9.34□□□□□ -0.92
TCOF1-204ENST00000427724 C1orf123Q9NWV4 160 aa9.34□□□□□ -0.92
TCOF1-204ENST00000427724 FOXD3Q9UJU5 478 aaPredicted RBP9.34□□□□□ -0.92
TCOF1-204ENST00000427724 RAB22AQ9UL26 194 aa9.34□□□□□ -0.92
TCOF1-204ENST00000427724 FBXO7Q9Y3I1 522 aa9.34□□□□□ -0.92
TCOF1-204ENST00000427724 HMSDA8MTL9 139 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 LINC00587B1AMM8 73 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 TSPAN2O60636 221 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 CTAG2O75638 210 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 ACAA2P42765 397 aaKnown RBP9.33□□□□□ -0.92
TCOF1-204ENST00000427724 ASCL1P50553 236 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 LRRC29Q8WV35 223 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 OR8B4Q96RC9 309 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 PRO1933Q9H354 126 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 TMPRSS2O15393 492 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 CYTIPO60759 359 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms