RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 F8VWA3 439 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 SYNGR1O43759 233 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 IFNA2P01563 188 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 CELA3BP08861 270 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 FAM90A15PP0C7V4 464 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 FAM90A13PP0C7W8 464 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 FAM90A14PP0C7W9 464 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 FAM90A24PP0C7X0 464 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 CEACAM1P13688 526 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 PSMB6P28072 239 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 FGF12P61328 243 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 CYCSP99999 105 aaKnown RBP12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 ZNF345Q14585 488 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 TMEM211Q6ICI0 200 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 OR2T2Q6IF00 324 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 MYPOPQ86VE0 399 aaPredicted RBP12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 CNEP1R1Q8N9A8 125 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 HS3ST6Q96QI5 342 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 LIME1Q9H400 295 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 METTL8Q9H825 291 aaKnown RBP12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 MTCH1Q9NZJ7 389 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 KIF25Q9UIL4 384 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 MPC1Q9Y5U8 109 aa12.01□□□□□ -0.49
APOBEC3D-202ENST00000427494 CELSR3Q9NYQ7 3312 aa12□□□□□ -0.49
APOBEC3D-202ENST00000427494 KANTRA0A1W2PQU2 76 aa12□□□□□ -0.49
APOBEC3D-202ENST00000427494 RNF222A6NCQ9 220 aa12□□□□□ -0.49
APOBEC3D-202ENST00000427494 ZNF205O95201 554 aa12□□□□□ -0.49
APOBEC3D-202ENST00000427494 SPDEFO95238 335 aa12□□□□□ -0.49
APOBEC3D-202ENST00000427494 ZNF14P17017 642 aaPredicted RBP12□□□□□ -0.49
APOBEC3D-202ENST00000427494 SPINK2P20155 84 aa12□□□□□ -0.49
APOBEC3D-202ENST00000427494 PMELP40967 661 aa12□□□□□ -0.49
APOBEC3D-202ENST00000427494 UBA52P62987 128 aaKnown RBP12□□□□□ -0.49
APOBEC3D-202ENST00000427494 BEX5Q5H9J7 111 aa12□□□□□ -0.49
APOBEC3D-202ENST00000427494 HAGHLQ6PII5 290 aaPredicted RBP12□□□□□ -0.49
APOBEC3D-202ENST00000427494 ACOT7LQ6ZUV0 252 aa12□□□□□ -0.49
APOBEC3D-202ENST00000427494 EXTL1Q92935 676 aa12□□□□□ -0.49
APOBEC3D-202ENST00000427494 TOMM40LQ969M1 308 aa12□□□□□ -0.49
APOBEC3D-202ENST00000427494 SARAFQ96BY9 339 aa12□□□□□ -0.49
APOBEC3D-202ENST00000427494 CDH20Q9HBT6 801 aa12□□□□□ -0.49
APOBEC3D-202ENST00000427494 IL36RNQ9UBH0 155 aa12□□□□□ -0.49
APOBEC3D-202ENST00000427494 KCNMB2Q9Y691 235 aa12□□□□□ -0.49
APOBEC3D-202ENST00000427494 BCL2L11O43521 198 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 CEACAM4O75871 244 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 ZNF728P0DKX0 622 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 RBMXP38159 391 aaKnown RBP11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 IDH3GP51553 393 aaPredicted RBP11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 MRPL49Q13405 166 aaKnown RBP11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 GUSBP1Q15486 140 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 DHRS11Q6UWP2 260 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 Q6ZPA2 131 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 Q6ZT83 130 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 SGPP2Q8IWX5 399 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 C9orf106Q8NAJ2 232 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 INO80EQ8NBZ0 244 aaPredicted RBP11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 DECR2Q9NUI1 292 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 TEX13DA0A0J9YY54 714 aaPredicted RBP11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 OR5B21A6NL26 309 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 MPTX1A8MV57 137 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 CA6P23280 308 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 CALCRP30988 508 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 FCGR2CP31995 323 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 FXYD4P59646 89 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 GNG3P63215 75 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 GABRA6Q16445 453 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 PLEKHN1Q494U1 663 aaPredicted RBP11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 ZNF573Q86YE8 665 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 CCDC36Q8IYA8 594 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 ZADH2Q8N4Q0 377 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 CCDC120Q96HB5 630 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 DHRS9Q9BPW9 319 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 C1orf123Q9NWV4 160 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 DLL3Q9NYJ7 618 aa11.99□□□□□ -0.49
APOBEC3D-202ENST00000427494 CRYM-AS1A6NIL9 109 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 SMPD2O60906 423 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 HOXB5P09067 269 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 RRASP10301 218 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 PRKACAP17612 351 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 GLP1RP43220 463 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 TSC22D1Q15714 1073 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 MPV17LQ2QL34 196 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 ABCA11PQ4W5N1 156 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 VWA1Q6PCB0 445 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 ST8SIA2Q92186 375 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 DCUN1D4Q92564 292 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 OR10C1Q96KK4 312 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 ZNF488Q96MN9 340 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 WDR13Q9H1Z4 485 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 POM121CA8CG34 1229 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 PRSS44E7EML9 344 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 J3QW42 95 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 HSPB6O14558 160 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 RLN2P04090 185 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 DUSP1P28562 367 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 NBL1P41271 181 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 KIR2DL2P43627 348 aaPredicted RBP11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 PIGPP57054 158 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 PPP1CBP62140 327 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 ZNF169Q14929 603 aaPredicted RBP11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 FBXW12Q6X9E4 464 aa11.98□□□□□ -0.49
APOBEC3D-202ENST00000427494 NEK7Q8TDX7 302 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms