RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 ZNF788Q6ZQV5 615 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 OR4C3Q8NH37 302 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 HSD17B10Q99714 261 aaKnown RBP12.89□□□□□ -0.35
PTPN13-203ENST00000427191 TXNDC17Q9BRA2 123 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 PRR14Q9BWN1 585 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 TBX21Q9UL17 535 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 USP54Q70EL1 1684 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 ZBTB42B2RXF5 422 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 H3BP45 60 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 CTSDP07339 412 aaPredicted RBP12.89□□□□□ -0.35
PTPN13-203ENST00000427191 LPAR6P43657 344 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 LOXL2Q9Y4K0 774 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 SPTBP11277 2137 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 A0A1W2PNR3 127 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 CRXO43186 299 aaPredicted RBP12.89□□□□□ -0.35
PTPN13-203ENST00000427191 ID1P41134 155 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 SPACA5Q96QH8 159 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 PRSS50Q9UI38 385 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 GEMIN2O14893 280 aaKnown RBP12.89□□□□□ -0.35
PTPN13-203ENST00000427191 CDC14BO60729 498 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 SRP14P37108 136 aaKnown RBP12.89□□□□□ -0.35
PTPN13-203ENST00000427191 METAP1P53582 386 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 PAFAH1B2P68402 229 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 MRGPRGQ86SM5 289 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 MOGAT1Q96PD6 335 aa12.89□□□□□ -0.35
PTPN13-203ENST00000427191 FAM221AA4D161 298 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 STARD4Q96DR4 205 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 F5P12259 2224 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 DNPH1O43598 174 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 EPPINO95925 133 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 SLC37A1P57057 533 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 OR2D2Q9H210 308 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 MED29Q9NX70 200 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 PRNDQ9UKY0 176 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 H3BVH4 76 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 MT-ND6P03923 174 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 FABP2P12104 132 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 PPP1R1AQ13522 171 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 INPP5JQ15735 1006 aaPredicted RBP12.88□□□□□ -0.35
PTPN13-203ENST00000427191 SLC25A35Q3KQZ1 300 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 PAQR6Q6TCH4 344 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 FAM219AQ8IW50 185 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 TCFL5Q9UL49 500 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 TRDCB7Z8K6 153 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 ZNF345Q14585 488 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 TDHQ8IZJ6 230 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 WDR31Q8NA23 367 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 TRIP12Q14669 1992 aaPredicted RBP12.88□□□□□ -0.35
PTPN13-203ENST00000427191 TRBV5-4A0A0C4DH59 114 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 M0R296 226 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 SLC35E4Q6ICL7 350 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 TMEM207Q6UWW9 146 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 LYG1Q8N1E2 194 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 OR1B1Q8NGR6 318 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 SLIRPQ9GZT3 109 aaKnown RBP12.88□□□□□ -0.35
PTPN13-203ENST00000427191 CXCL13O43927 109 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 HOXA6P31267 233 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 CEACAM16Q2WEN9 425 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 ARHGAP5-AS1Q96IT6 56 aa12.88□□□□□ -0.35
PTPN13-203ENST00000427191 SNRNP200O75643 2136 aaKnown RBP12.88□□□□□ -0.35
PTPN13-203ENST00000427191 MRGPREQ86SM8 312 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 PTOV1Q86YD1 416 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 FAM24BQ8N5W8 94 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 ZNF784Q8NCA9 323 aaPredicted RBP12.87□□□□□ -0.35
PTPN13-203ENST00000427191 TINAGL1Q9GZM7 467 aaPredicted RBP12.87□□□□□ -0.35
PTPN13-203ENST00000427191 PDFQ9HBH1 243 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 MBNL1Q9NR56 388 aaKnown RBP12.87□□□□□ -0.35
PTPN13-203ENST00000427191 PKD1L3Q7Z443 1732 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 CDK2AP1O14519 115 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 APCSP02743 223 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 KLF3P57682 345 aaPredicted RBP12.87□□□□□ -0.35
PTPN13-203ENST00000427191 DUSP2Q05923 314 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 MMP25Q9NPA2 562 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 SMCHD1A6NHR9 2005 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 FCGR3BO75015 233 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 ZNF253O75346 499 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 COL8A1P27658 744 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 EMDP50402 254 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 SLC35E3Q7Z769 313 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 ZNF738Q8NE65 137 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 FGF22Q9HCT0 170 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 CA11O75493 328 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 MUC20Q8N307 709 aaPredicted RBP12.87□□□□□ -0.35
PTPN13-203ENST00000427191 SNRNP40Q96DI7 357 aaKnown RBP12.87□□□□□ -0.35
PTPN13-203ENST00000427191 ASB16Q96NS5 453 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 TIAL1Q01085 375 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTPN13-203ENST00000427191 TGIF2LXQ8IUE1 241 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 IL22RA2Q969J5 263 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 CES1P1Q9UKY3 287 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 PIKFYVEQ9Y2I7 2098 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 MYO7AQ13402 2215 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 TDRD15B5MCY1 1934 aaKnown RBP12.87□□□□□ -0.35
PTPN13-203ENST00000427191 RAB37Q96AX2 223 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 RASL11BQ9BPW5 248 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 CXXC4Q9H2H0 198 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 ERRFI1Q9UJM3 462 aaPredicted RBP12.87□□□□□ -0.35
PTPN13-203ENST00000427191 HEATR5BQ9P2D3 2071 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 TRAV38-1A0A0B4J264 116 aa12.87□□□□□ -0.35
PTPN13-203ENST00000427191 SPRY1O43609 319 aaPredicted RBP12.87□□□□□ -0.35
PTPN13-203ENST00000427191 ONECUT2O95948 504 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms