RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	COMMD5	Q9GZQ3	224 aa		11.65	□□□□□ -0.54
BDNF-208	ENST00000418212	IL17B	Q9UHF5	180 aa		11.65	□□□□□ -0.54
BDNF-208	ENST00000418212	PCNX2	A6NKB5	2137 aa		11.65	□□□□□ -0.55
BDNF-208	ENST00000418212	FAM74A7	A6NL05	159 aa		11.65	□□□□□ -0.55
BDNF-208	ENST00000418212		M0R1X1	148 aa		11.65	□□□□□ -0.55
BDNF-208	ENST00000418212	GEMIN2	O14893	280 aa	Known RBP	11.65	□□□□□ -0.55
BDNF-208	ENST00000418212	ONECUT2	O95948	504 aa		11.65	□□□□□ -0.55
BDNF-208	ENST00000418212	SNRPE	P62304	92 aa	Known RBP	11.65	□□□□□ -0.55
BDNF-208	ENST00000418212	FAM74A3	Q4VXF1	159 aa		11.65	□□□□□ -0.55
BDNF-208	ENST00000418212	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.65	□□□□□ -0.55
BDNF-208	ENST00000418212	FAM122B	Q7Z309	247 aa		11.65	□□□□□ -0.55
BDNF-208	ENST00000418212	CISD2	Q8N5K1	135 aa	Known RBP	11.65	□□□□□ -0.55
BDNF-208	ENST00000418212	RNF133	Q8WVZ7	376 aa		11.65	□□□□□ -0.55
BDNF-208	ENST00000418212	CTHRC1	Q96CG8	243 aa		11.65	□□□□□ -0.55
BDNF-208	ENST00000418212	WDR54	Q9H977	334 aa		11.65	□□□□□ -0.55
BDNF-208	ENST00000418212	HEATR1	Q9H583	2144 aa	Known RBP	11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	AQP8	O94778	261 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	AGFG2	O95081	481 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	GP1BA	P07359	652 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	PPP1CB	P62140	327 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	LSM6	P62312	80 aa	Known RBP	11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	TLE1	Q04724	770 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	MICB	Q29980	383 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	OR2M7	Q8NG81	312 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	FBLIM1	Q8WUP2	373 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	EDARADD	Q8WWZ3	215 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	DAZAP1	Q96EP5	407 aa	Known RBP	11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	PILRB	Q9UKJ0	227 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	ANK1	P16157	1881 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	C21orf140	B9A014	251 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	GPR31	O00270	319 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	TAGLN2	P37802	199 aa	Known RBP	11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	GSK3A	P49840	483 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	RBM14	Q96PK6	669 aa	Known RBP	11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	AICDA	Q9GZX7	198 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	SLC25A32	Q9H2D1	315 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	PIGM	Q9H3S5	423 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	MSL2	Q9HCI7	577 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	LIN7C	Q9NUP9	197 aa	Known RBP	11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	PIEZO1	Q92508	2521 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	LRP5L	A4QPB2	252 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	CLEC18A	A5D8T8	446 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	TUBAL3	A6NHL2	446 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	ABCD4	O14678	606 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	MB	P02144	154 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	IL3RA	P26951	378 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	CEACAM6	P40199	344 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	GNG10	P50151	68 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	MLF1	P58340	268 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	RAB32	Q13637	225 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	HLX	Q14774	488 aa	Predicted RBP	11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	ATP1A1-AS1	Q5TC04	95 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	CLEC18C	Q8NCF0	446 aa		11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	APOBEC4	Q8WW27	367 aa	Known RBP	11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	MRPS24	Q96EL2	167 aa	Known RBP	11.64	□□□□□ -0.55
BDNF-208	ENST00000418212	CSPG4	Q6UVK1	2322 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	MPC2	O95563	127 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	IL5	P05113	134 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	ZNF705D	P0CH99	300 aa	Predicted RBP	11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	ZNF705B	P0CI00	300 aa	Predicted RBP	11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	ZBTB25	P24278	435 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	KCNJ3	P48549	501 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	CATSPERD	Q86XM0	798 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	ARL6IP6	Q8N6S5	226 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	CPEB3	Q8NE35	698 aa	Known RBP	11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	MRGPRD	Q8TDS7	321 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	ZNF629	Q9UEG4	869 aa	Predicted RBP	11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	PNP	P00491	289 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	VSIG8	P0DPA2	414 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	OR3A1	P47881	315 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	SSBP1	Q04837	148 aa	Known RBP	11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	ERGIC1	Q969X5	290 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	SCARF2	Q96GP6	870 aa	Predicted RBP	11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	SPSB2	Q99619	263 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	TPPP3	Q9BW30	176 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	HES7	Q9BYE0	225 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	SLC17A5	Q9NRA2	495 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	PSG11	Q9UQ72	335 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	CYB5B	O43169	146 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	GALR2	O43603	387 aa	Predicted RBP	11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	DXO	O77932	396 aa	Known RBP	11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	TBX6	O95947	436 aa	Predicted RBP	11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	CD37	P11049	281 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	CALCR	P30988	508 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	STPG1	Q5TH74	334 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	C11orf87	Q6NUJ2	197 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	LYG1	Q8N1E2	194 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	BVES	Q8NE79	360 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	OR5AP2	Q8NGF4	316 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	LRRC29	Q8WV35	223 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	MS4A3	Q96HJ5	214 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	GPR35	Q9HC97	309 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	SLC7A10	Q9NS82	523 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	ST6GALNAC2	Q9UJ37	374 aa		11.63	□□□□□ -0.55
BDNF-208	ENST00000418212	ANKRD20A5P	A0PJZ0	165 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	MGST1	P10620	155 aa	Known RBP	11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	NAA40	Q86UY6	237 aa		11.62	□□□□□ -0.55
BDNF-208	ENST00000418212	DYRK2	Q92630	601 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms