RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 NFATC4Q14934 902 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 TCEA2Q15560 299 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 RTL6Q6ICC9 239 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 CMTM1Q8IZ96 169 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 LGI3Q8N145 548 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 BAHD1Q8TBE0 780 aaPredicted RBP7□□□□□ -1.29
HMGXB4-202ENST00000418170 FGF22Q9HCT0 170 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 FKBP11Q9NYL4 201 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 CISD1Q9NZ45 108 aaKnown RBP7□□□□□ -1.29
HMGXB4-202ENST00000418170 THAP10Q9P2Z0 257 aaPredicted RBP7□□□□□ -1.29
HMGXB4-202ENST00000418170 MCTS1Q9ULC4 181 aaKnown RBP7□□□□□ -1.29
HMGXB4-202ENST00000418170 NPIPB7O75200 414 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 WISP1O95388 367 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 KLF8O95600 359 aaPredicted RBP7□□□□□ -1.29
HMGXB4-202ENST00000418170 IL33O95760 270 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 CD55P08174 381 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 ELLP55199 621 aaPredicted RBP7□□□□□ -1.29
HMGXB4-202ENST00000418170 SLC37A1P57057 533 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 TMEM123Q8N131 208 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 DIRC2Q96SL1 478 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 LPAR2Q9HBW0 351 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 CHST11Q9NPF2 352 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 GNG13Q9P2W3 67 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 ANXA10Q9UJ72 324 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 ZNF728P0DKX0 622 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 ABCA11PQ4W5N1 156 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 TSPO2Q5TGU0 170 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 OGFOD3Q6PK18 319 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 C17orf78Q8N4C9 275 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 OR10S1Q8NGN2 331 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 TBL1XR1Q9BZK7 514 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 RTN4RQ9BZR6 473 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 ZBP1Q9H171 429 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 PLEKHF2Q9H8W4 249 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 DEC1Q9P2X7 70 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 LAMP3Q9UQV4 416 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 CLDN16Q9Y5I7 305 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 TRBV23OR9-2A0A075B6M9 112 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 TRDCB7Z8K6 153 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 BCL2P10415 239 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 HLA-DOBP13765 273 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 ZNF17P17021 662 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 OMGP23515 440 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 BRS3P32247 399 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 FAM3BP58499 235 aaPredicted RBP7□□□□□ -1.29
HMGXB4-202ENST00000418170 WDR25Q64LD2 544 aaPredicted RBP7□□□□□ -1.29
HMGXB4-202ENST00000418170 OR5C1Q8NGR4 320 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 TOMM40LQ969M1 308 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 MOB1AQ9H8S9 216 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 SERGEFQ9UGK8 458 aa7□□□□□ -1.29
HMGXB4-202ENST00000418170 IGKV1D-43A0A0B4J1Z2 117 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 HCRTR2O43614 444 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 SCGB1D1O95968 90 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 CLPSP04118 112 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 IRF2P14316 349 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 RUNX1Q01196 453 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 SAPCD1Q5SSQ6 148 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 ABHD12BQ7Z5M8 362 aaPredicted RBP6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 DEFB128Q7Z7B8 93 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 H1FOOQ8IZA3 346 aaPredicted RBP6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 GBGT1Q8N5D6 347 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 TMEM252Q8N6L7 170 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 CCDC3Q9BQI4 270 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 TM2D1Q9BX74 207 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 SLC2A9Q9NRM0 540 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 GLRX2Q9NS18 164 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 LYRM2Q9NU23 88 aaPredicted RBP6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 IGKV1-9A0A0C4DH69 117 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 PROB1E7EW31 1015 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 MMP9P14780 707 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 OR10J1P30954 320 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 VAMP2P63027 116 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 SSPNQ14714 243 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 ARMC6Q6NXE6 501 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 ZNF705AQ6ZN79 300 aaPredicted RBP6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 C1QL2Q7Z5L3 287 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 COMMD2Q86X83 199 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 OR51G1Q8NGK1 321 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 POC1BQ8TC44 478 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 PTPMT1Q8WUK0 201 aaPredicted RBP6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 NAGKQ9UJ70 344 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 ADAMTS9Q9P2N4 1935 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 DOCK8Q8NF50 2099 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 CDS2O95674 445 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 HPRT1P00492 218 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 GLI4P10075 376 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 GZMHP20718 246 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 IDH3GP51553 393 aaPredicted RBP6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 DCAF7P61962 342 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 ACOT6Q3I5F7 207 aaPredicted RBP6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 ACTL10Q5JWF8 245 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 FBXW9Q5XUX1 488 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 SLC38A9Q8NBW4 561 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 OR5L1Q8NGL2 311 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 NEK7Q8TDX7 302 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 ASB10Q8WXI3 467 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 TSLPQ969D9 159 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 KCNK17Q96T54 332 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 P2RX4Q99571 388 aa6.99□□□□□ -1.29
HMGXB4-202ENST00000418170 APOOQ9BUR5 198 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms