RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 MARC2Q969Z3 335 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 CPNE4Q96A23 557 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 PNPLA2Q96AD5 504 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 FAM131CQ96AQ9 280 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 LINC00052Q96N35 136 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 FOPNLQ96NB1 174 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 PRAP1Q96NZ9 151 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 DEFB118Q96PH6 123 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR5B2Q96R09 309 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 ZNF649Q9BS31 505 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 DPH7Q9BTV6 452 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 C20orf85Q9H1P6 137 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 METTL17Q9H7H0 456 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 SLC7A10Q9NS82 523 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 LHX3Q9UBR4 397 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 CLEC4EQ9ULY5 219 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 COPS3Q9UNS2 423 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 PPP1R3CQ9UQK1 317 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 POLDIP2Q9Y2S7 368 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 KLHDC2Q9Y2U9 406 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 MMACHCQ9Y4U1 282 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 OR51B4Q9Y5P0 310 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 ETV7Q9Y603 341 aa3.03□□□□□ -1.92
HMGB3P23-201ENST00000414981 MYO16Q9Y6X6 1858 aa3.03□□□□□ -1.93
HMGB3P23-201ENST00000414981 A0A0D9SEW6 157 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 KBTBD11-OT1A0A1B0GTJ5 212 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 ANKRD20A5PA0PJZ0 165 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM218A2RU14 115 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 CASTOR2A6NHX0 329 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 RFPL4AA6NLU0 287 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 RFPL4AL1F8VTS6 287 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 SURF4O15260 269 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 EEF1E1O43324 174 aaKnown RBP3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 SCO1O75880 301 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 ATG12O94817 140 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 NDUFB6O95139 128 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 ETHE1O95571 254 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 C6orf47O95873 294 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 CD160O95971 181 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 IGSF6O95976 241 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 CFDP00746 253 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 ATP1B1P05026 303 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 GUSBP08236 651 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 UCHL1P09936 223 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC25A4P12235 298 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 GP1BBP13224 206 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF43P17038 809 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 HLA-GP17693 338 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 CXCL3P19876 107 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 DTYMKP23919 212 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 S100PP25815 95 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 AQP1P29972 269 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 RFC3P40938 356 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 TSFMP43897 325 aaKnown RBP3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 OMPP47874 163 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 MEOX2P50222 304 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 P2RY4P51582 365 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 LBX1P52954 281 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 LSM6P62312 80 aaKnown RBP3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 TWF1Q12792 350 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 HTR4Q13639 388 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 PGGHGQ32M88 737 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 NDUFAF6Q330K2 333 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 RNF212Q495C1 297 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 COX19Q49B96 90 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 TEX30Q5JUR7 227 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 DNLZQ5SXM8 178 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 IDNKQ5T6J7 187 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR2G6Q5TZ20 316 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 DMKNQ6E0U4 476 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 SPINK14Q6IE38 97 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 ACSM5Q6NUN0 579 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 FAM71F2Q6NXP2 309 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 AGTRAPQ6RW13 159 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 UNQ9370/PRO34162Q6UXP9 181 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF562Q6V9R5 426 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 Q6ZRP5 223 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMUB2Q71RG4 321 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 ABHD13Q7L211 337 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 S100A7AQ86SG5 101 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM25Q86YD3 366 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 C2orf73Q8N5S3 287 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 SAMD12Q8N8I0 201 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 CCDC71LQ8N9Z2 235 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 THAP8Q8NA92 274 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 NECAP1Q8NC96 275 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 NFAM1Q8NET5 270 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 PXT1Q8NFP0 134 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR2T33Q8NG76 320 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR4F15Q8NGB8 312 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR5AU1Q8NGC0 362 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR11G2Q8NGC1 345 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR6N1Q8NGY5 312 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR1S1Q8NH92 325 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR1L3Q8NH93 324 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 PIGXQ8TBF5 258 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 C16orf78Q8WTQ4 265 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 THEM6Q8WUY1 208 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 RNF133Q8WVZ7 376 aa3.02□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM239Q8WW34 195 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms