RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 PEX2P28328 305 aa9.65□□□□□ -0.86
LIMS2-210ENST00000413578 CD34P28906 385 aa9.65□□□□□ -0.86
LIMS2-210ENST00000413578 OR3A1P47881 315 aa9.65□□□□□ -0.86
LIMS2-210ENST00000413578 THBS3P49746 956 aa9.65□□□□□ -0.86
LIMS2-210ENST00000413578 P2RX3P56373 397 aa9.65□□□□□ -0.86
LIMS2-210ENST00000413578 CXCR4P61073 352 aa9.65□□□□□ -0.86
LIMS2-210ENST00000413578 ESRRGP62508 458 aa9.65□□□□□ -0.86
LIMS2-210ENST00000413578 ZNF146Q15072 292 aa9.65□□□□□ -0.86
LIMS2-210ENST00000413578 GRK1Q15835 563 aa9.65□□□□□ -0.86
LIMS2-210ENST00000413578 SNAPC1Q16533 368 aa9.65□□□□□ -0.86
LIMS2-210ENST00000413578 RTN4RL2Q86UN3 420 aa9.65□□□□□ -0.86
LIMS2-210ENST00000413578 ABHD12Q8N2K0 398 aa9.65□□□□□ -0.86
LIMS2-210ENST00000413578 ASB9Q96DX5 294 aa9.65□□□□□ -0.86
LIMS2-210ENST00000413578 CNN2Q99439 309 aaKnown RBP9.65□□□□□ -0.86
LIMS2-210ENST00000413578 MNTQ99583 582 aa9.65□□□□□ -0.86
LIMS2-210ENST00000413578 CHST5Q9GZS9 411 aa9.65□□□□□ -0.86
LIMS2-210ENST00000413578 CHST6Q9GZX3 395 aa9.65□□□□□ -0.86
LIMS2-210ENST00000413578 UBE2J1Q9Y385 318 aaPredicted RBP9.65□□□□□ -0.86
LIMS2-210ENST00000413578 SNX5Q9Y5X3 404 aa9.65□□□□□ -0.86
LIMS2-210ENST00000413578 TRBV2A0A0J9YWF9 115 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 FAM230AA0A1W2PPH8 454 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 MGST3O14880 152 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 PRKYO43930 277 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 ANXA8P13928 327 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 BRS3P32247 399 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 GDNFP39905 211 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 MNAT1P51948 309 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 FUT6P51993 359 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 EFNB1P98172 346 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 DCTN2Q13561 401 aaKnown RBP9.64□□□□□ -0.87
LIMS2-210ENST00000413578 PRAMEF5Q5TYX0 476 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 AADACL4Q5VUY2 407 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 HEPN1Q6WQI6 88 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 SLC25A26Q70HW3 274 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 BCDIN3DQ7Z5W3 292 aaKnown RBP9.64□□□□□ -0.87
LIMS2-210ENST00000413578 PIGWQ7Z7B1 504 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 EGFL6Q8IUX8 553 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 ZNF596Q8TC21 504 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 BCAS4Q8TDM0 211 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 CANT1Q8WVQ1 401 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 CORO2AQ92828 525 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 EMG1Q92979 244 aaKnown RBP9.64□□□□□ -0.87
LIMS2-210ENST00000413578 P2RX4Q99571 388 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 ZNF556Q9HAH1 456 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 ADGRL4Q9HBW9 690 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 RBFOX1Q9NWB1 397 aaKnown RBP9.64□□□□□ -0.87
LIMS2-210ENST00000413578 TVP23BQ9NYZ1 205 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 GTF2A1LQ9UNN4 478 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 SLC7A11Q9UPY5 501 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 ARL2BPQ9Y2Y0 163 aa9.64□□□□□ -0.87
LIMS2-210ENST00000413578 A0A087X0M5 115 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 A0A1B0GX30 115 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 FAM90A18PA6NE21 464 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 FAM90A16PA6NEW6 464 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 FAM90A20PA6NIJ5 464 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 FAM90A9PA6NNJ1 464 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 FAM90A12PA8MX19 464 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 FAM90A5PA8MXJ8 464 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 LEUTXA8MZ59 168 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 B2RBV5 119 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 H0YHG0 523 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 M0QZK8 103 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 ENTPD6O75354 484 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 DCTN3O75935 186 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 CCDC159P0C7I6 412 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 FAM90A15PP0C7V4 464 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 FAM90A13PP0C7W8 464 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 FAM90A14PP0C7W9 464 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 FAM90A24PP0C7X0 464 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 GABRR1P24046 479 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 NPBWR2P48146 333 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 CRISP1P54107 249 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 RPL23AP62750 156 aaKnown RBP9.63□□□□□ -0.87
LIMS2-210ENST00000413578 HLA-DRB5Q30154 266 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 KHDC1LQ5JSQ8 128 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 NKAPLQ5M9Q1 402 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 UTF1Q5T230 341 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 TPTE2P1Q5T6R2 138 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 SLX4IPQ5VYV7 408 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 OR52W1Q6IF63 320 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 C18orf65Q6ZTR6 163 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 MEPCEQ7L2J0 689 aaKnown RBP9.63□□□□□ -0.87
LIMS2-210ENST00000413578 SSX6Q7RTT6 188 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 OR2W3Q7Z3T1 314 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 CATSPERDQ86XM0 798 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 SLC35F2Q8IXU6 374 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 Q8IYB0 196 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 ENTHD1Q8IYW4 607 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 DPF1Q92782 380 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 MCRIP2Q9BUT9 160 aaKnown RBP9.63□□□□□ -0.87
LIMS2-210ENST00000413578 ZNF286AQ9HBT8 521 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 CLN6Q9NWW5 311 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 TAS2R3Q9NYW6 316 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 PCDHGB5Q9Y5G0 923 aa9.63□□□□□ -0.87
LIMS2-210ENST00000413578 IGKV1-9A0A0C4DH69 117 aa9.62□□□□□ -0.87
LIMS2-210ENST00000413578 PSMB11A5LHX3 300 aa9.62□□□□□ -0.87
LIMS2-210ENST00000413578 BUB1B-PAK6H3BSN5 160 aa9.62□□□□□ -0.87
LIMS2-210ENST00000413578 GATBO75879 557 aaKnown RBP9.62□□□□□ -0.87
LIMS2-210ENST00000413578 INMTO95050 263 aa9.62□□□□□ -0.87
LIMS2-210ENST00000413578 NHLRC4P0CG21 123 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms