RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 LHFPL2Q6ZUX7 228 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 CPEB2Q7Z5Q1 589 aaKnown RBP15.31■□□□□ 0.04
SDCBP-202ENST00000413219 INTS12Q96CB8 462 aaKnown RBP15.31■□□□□ 0.04
SDCBP-202ENST00000413219 SPACA9Q96E40 222 aaPredicted RBP15.31■□□□□ 0.04
SDCBP-202ENST00000413219 RARRES2Q99969 163 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 PAPOLGQ9BWT3 736 aaKnown RBP15.31■□□□□ 0.04
SDCBP-202ENST00000413219 PCED1AQ9H1Q7 454 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 PLEK2Q9NYT0 353 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 IL36GQ9NZH8 169 aa15.31■□□□□ 0.04
SDCBP-202ENST00000413219 HSPA12AO43301 675 aa15.3■□□□□ 0.04
SDCBP-202ENST00000413219 PNLIPP16233 465 aa15.3■□□□□ 0.04
SDCBP-202ENST00000413219 ATP6V0CP27449 155 aa15.3■□□□□ 0.04
SDCBP-202ENST00000413219 RPS10P46783 165 aaKnown RBP15.3■□□□□ 0.04
SDCBP-202ENST00000413219 RBP2P50120 134 aa15.3■□□□□ 0.04
SDCBP-202ENST00000413219 HERV-K104P61576 105 aa15.3■□□□□ 0.04
SDCBP-202ENST00000413219 SNAI3Q3KNW1 292 aa15.3■□□□□ 0.04
SDCBP-202ENST00000413219 SP5Q6BEB4 398 aaPredicted RBP15.3■□□□□ 0.04
SDCBP-202ENST00000413219 TMEM123Q8N131 208 aa15.3■□□□□ 0.04
SDCBP-202ENST00000413219 SLC35G3Q8N808 338 aa15.3■□□□□ 0.04
SDCBP-202ENST00000413219 AKR7LQ8NHP1 331 aa15.3■□□□□ 0.04
SDCBP-202ENST00000413219 REEP6Q96HR9 211 aa15.3■□□□□ 0.04
SDCBP-202ENST00000413219 BCL2L14Q9BZR8 327 aa15.3■□□□□ 0.04
SDCBP-202ENST00000413219 SLC25A31Q9H0C2 315 aa15.3■□□□□ 0.04
SDCBP-202ENST00000413219 HIPK2Q9H2X6 1198 aa15.3■□□□□ 0.04
SDCBP-202ENST00000413219 TREM2Q9NZC2 230 aa15.3■□□□□ 0.04
SDCBP-202ENST00000413219 ADAMTS20P59510 1910 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 IGKV1-27A0A075B6S5 117 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 CXorf65A6NEN9 183 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 TRDCB7Z8K6 153 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 H3BQ15 152 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 SPRY1O43609 319 aaPredicted RBP15.29■□□□□ 0.04
SDCBP-202ENST00000413219 DBHP09172 617 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 CRYGSP22914 178 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 CADM4Q8NFZ8 388 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 OR10AD1Q8NGE0 317 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 SPIN2AQ99865 258 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 SPIN2BQ9BPZ2 258 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 PLEKHF2Q9H8W4 249 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 SIRT7Q9NRC8 400 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 RALGAPA1Q6GYQ0 2036 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 FAM230AA0A1W2PPH8 454 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 CD63P08962 238 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 SRP19P09132 144 aaKnown RBP15.29■□□□□ 0.04
SDCBP-202ENST00000413219 OSR2Q8N2R0 312 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 RAB39BQ96DA2 213 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 OPA3Q9H6K4 179 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 PLSCR2Q9NRY7 297 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 ZNF581Q9P0T4 197 aa15.29■□□□□ 0.04
SDCBP-202ENST00000413219 IGSF23A1L1A6 192 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 ZNF732B4DXR9 585 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 HSD17B6O14756 317 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 TOX3O15405 576 aaPredicted RBP15.28■□□□□ 0.04
SDCBP-202ENST00000413219 SLC34A2O95436 690 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 HSPB1P04792 205 aaKnown RBP15.28■□□□□ 0.04
SDCBP-202ENST00000413219 NKX2-1P43699 371 aaPredicted RBP15.28■□□□□ 0.04
SDCBP-202ENST00000413219 RND3P61587 244 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 CCL20P78556 96 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 MRPS34P82930 218 aaKnown RBP15.28■□□□□ 0.04
SDCBP-202ENST00000413219 RAB35Q15286 201 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 OR2B11Q5JQS5 317 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 FAM27BQ5VT28 67 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 TMEM211Q6ICI0 200 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 ZNF574Q6ZN55 896 aaPredicted RBP15.28■□□□□ 0.04
SDCBP-202ENST00000413219 OR11L1Q8NGX0 322 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 BORCS8Q96FH0 119 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 POM121Q96HA1 1249 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 TP53RKQ96S44 253 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 RASL10BQ96S79 203 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 RBM24Q9BX46 236 aaKnown RBP15.28■□□□□ 0.04
SDCBP-202ENST00000413219 TMEM222Q9H0R3 208 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 FOXD3Q9UJU5 478 aaPredicted RBP15.28■□□□□ 0.04
SDCBP-202ENST00000413219 UNC80Q8N2C7 3258 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 C3orf85A0A1B0GTC6 90 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 FAM24AA6NFZ4 105 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 NPIPA2E9PIF3 369 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 NPIPA3F8WFD2 350 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 GEMIN2O14893 280 aaKnown RBP15.28■□□□□ 0.04
SDCBP-202ENST00000413219 GPR37O15354 613 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 MPPED1O15442 326 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 ZNF205O95201 554 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 EN2P19622 333 aaPredicted RBP15.28■□□□□ 0.04
SDCBP-202ENST00000413219 S100A2P29034 98 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 TAGLN2P37802 199 aaKnown RBP15.28■□□□□ 0.04
SDCBP-202ENST00000413219 UBE2KP61086 200 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 ZNF506Q5JVG8 444 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 TMEM42Q69YG0 159 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 ZNF610Q8N9Z0 462 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 GNPNAT1Q96EK6 184 aaPredicted RBP15.28■□□□□ 0.04
SDCBP-202ENST00000413219 TMEM56Q96MV1 263 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 ZNF385AQ96PM9 386 aaKnown RBP15.28■□□□□ 0.04
SDCBP-202ENST00000413219 LYRM2Q9NU23 88 aaPredicted RBP15.28■□□□□ 0.04
SDCBP-202ENST00000413219 PARPBPQ9NWS1 579 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 TMEM56-RWDD3S4R434 201 aa15.28■□□□□ 0.04
SDCBP-202ENST00000413219 NCOA6Q14686 2063 aaPredicted RBP15.27■□□□□ 0.04
SDCBP-202ENST00000413219 A0A1B0GV50 99 aa15.27■□□□□ 0.03
SDCBP-202ENST00000413219 MED19A0JLT2 244 aaPredicted RBP15.27■□□□□ 0.03
SDCBP-202ENST00000413219 NKX2-6A6NCS4 301 aa15.27■□□□□ 0.03
SDCBP-202ENST00000413219 TP53I11O14683 189 aa15.27■□□□□ 0.03
SDCBP-202ENST00000413219 PDCD6O75340 191 aa15.27■□□□□ 0.03
SDCBP-202ENST00000413219 YIF1AO95070 293 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms