RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 FAM90A5PA8MXJ8 464 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 FAM90A23PA8MXZ1 464 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 RFPL4AL1F8VTS6 287 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 ZNF205O95201 554 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 FAM90A15PP0C7V4 464 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 FAM90A13PP0C7W8 464 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 FAM90A14PP0C7W9 464 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 FAM90A24PP0C7X0 464 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 MGMTP16455 207 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 PRKACAP17612 351 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 RAB6AP20340 208 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 SERPINA2P20848 420 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 PRDX2P32119 198 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 AVPI1Q5T686 147 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 IDNKQ5T6J7 187 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 Q6P435 159 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 LINC00596Q86U02 117 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 FAM89BQ8N5H3 189 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 SPICQ8N5J4 248 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 DEFB108BQ8NET1 73 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 ACOT12Q8WYK0 555 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 SDSLQ96GA7 329 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 Q96M66 194 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 IFT22Q9H7X7 185 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 PATZ1Q9HBE1 687 aaKnown RBP12.71□□□□□ -0.37
LSM5-207ENST00000410044 SPATA2Q9UM82 520 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 ST3GAL6Q9Y274 331 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 YLPM1P49750 1951 aaKnown RBP12.7□□□□□ -0.38
LSM5-207ENST00000410044 DOCK11Q5JSL3 2073 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 IGHV3OR15-7A0A075B7D8 119 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 F5H0A9 414 aaPredicted RBP12.7□□□□□ -0.38
LSM5-207ENST00000410044 SH2D1BO14796 132 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 GYPAP02724 150 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 CHRM2P08172 466 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 WNT2P09544 360 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 RBM11P57052 281 aaKnown RBP12.7□□□□□ -0.38
LSM5-207ENST00000410044 GMFBP60983 142 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 RPS27AP62979 156 aaKnown RBP12.7□□□□□ -0.38
LSM5-207ENST00000410044 FAM189A2Q15884 450 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 MPV17LQ2QL34 196 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 OR10K2Q6IF99 312 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 BATF2Q8N1L9 274 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 CD177Q8N6Q3 437 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 OR5T2Q8NGG2 359 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 MED30Q96HR3 178 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 CMTM3Q96MX0 182 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 ZNF665Q9H7R5 613 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 CCDC59Q9P031 241 aaKnown RBP12.7□□□□□ -0.38
LSM5-207ENST00000410044 IL36RNQ9UBH0 155 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 MIOXQ9UGB7 285 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 GLS2Q9UI32 602 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 ETV7Q9Y603 341 aa12.7□□□□□ -0.38
LSM5-207ENST00000410044 FLNBO75369 2602 aaKnown RBP12.69□□□□□ -0.38
LSM5-207ENST00000410044 CSMD2Q7Z408 3487 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 A0A0B4J203 849 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 CEACAM18A8MTB9 384 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 H3BUI4 141 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 CRTAPO75718 401 aaPredicted RBP12.69□□□□□ -0.38
LSM5-207ENST00000410044 MPIG6BO95866 241 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 PAHP00439 452 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 SOX6P35712 828 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 LMO4P61968 165 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 LOXL1Q08397 574 aaPredicted RBP12.69□□□□□ -0.38
LSM5-207ENST00000410044 LYPD2Q6UXB3 125 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 SLC36A1Q7Z2H8 476 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 ZNF561Q8N587 486 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 CLDND2Q8NHS1 167 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 Q96MF0 132 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 GAFA1Q96PS6 74 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 URM1Q9BTM9 101 aaKnown RBP12.69□□□□□ -0.38
LSM5-207ENST00000410044 TMEM59Q9BXS4 323 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 SELENOIQ9C0D9 397 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 LPAR5Q9H1C0 372 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 BANF2Q9H503 90 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 MAB21L2Q9Y586 359 aa12.69□□□□□ -0.38
LSM5-207ENST00000410044 A0A075B6Q4 140 aa12.68□□□□□ -0.38
LSM5-207ENST00000410044 IGHV4-61A0A0C4DH41 118 aa12.68□□□□□ -0.38
LSM5-207ENST00000410044 ISPDA4D126 451 aa12.68□□□□□ -0.38
LSM5-207ENST00000410044 SIGLEC5O15389 551 aa12.68□□□□□ -0.38
LSM5-207ENST00000410044 HAND1O96004 215 aa12.68□□□□□ -0.38
LSM5-207ENST00000410044 SNRPBP14678 240 aaKnown RBP12.68□□□□□ -0.38
LSM5-207ENST00000410044 USF1P22415 310 aaPredicted RBP12.68□□□□□ -0.38
LSM5-207ENST00000410044 C11orf91Q3C1V1 193 aa12.68□□□□□ -0.38
LSM5-207ENST00000410044 PIGYQ3MUY2 71 aa12.68□□□□□ -0.38
LSM5-207ENST00000410044 ZNF841Q6ZN19 808 aa12.68□□□□□ -0.38
LSM5-207ENST00000410044 CHST4Q8NCG5 386 aa12.68□□□□□ -0.38
LSM5-207ENST00000410044 WFDC11Q8NEX6 87 aa12.68□□□□□ -0.38
LSM5-207ENST00000410044 OR5H6Q8NGV6 325 aa12.68□□□□□ -0.38
LSM5-207ENST00000410044 AP3S1Q92572 193 aa12.68□□□□□ -0.38
LSM5-207ENST00000410044 CCL13Q99616 98 aa12.68□□□□□ -0.38
LSM5-207ENST00000410044 GAL3ST1Q99999 423 aa12.68□□□□□ -0.38
LSM5-207ENST00000410044 REG4Q9BYZ8 158 aa12.68□□□□□ -0.38
LSM5-207ENST00000410044 SLIRPQ9GZT3 109 aaKnown RBP12.68□□□□□ -0.38
LSM5-207ENST00000410044 NXF2Q9GZY0 626 aaKnown RBP12.68□□□□□ -0.38
LSM5-207ENST00000410044 KCNK15Q9H427 330 aa12.68□□□□□ -0.38
LSM5-207ENST00000410044 FOXI3A8MTJ6 420 aaPredicted RBP12.67□□□□□ -0.38
LSM5-207ENST00000410044 GEMIN2O14893 280 aaKnown RBP12.67□□□□□ -0.38
LSM5-207ENST00000410044 DEGS1O15121 323 aa12.67□□□□□ -0.38
LSM5-207ENST00000410044 ADAM20O43506 726 aa12.67□□□□□ -0.38
LSM5-207ENST00000410044 ZNF737O75373 536 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms