RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 MTCP1P56278 107 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 OR12D2P58182 307 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 ACTA2P62736 377 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 ACTG2P63267 376 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 ZNF91Q05481 1191 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 ZNF146Q15072 292 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 SSX2Q16385 188 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 PLA1AQ53H76 456 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 MINOS1Q5TGZ0 78 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 FAM58AQ8N1B3 248 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 OR2G2Q8NGZ5 317 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 MRPL48Q96GC5 212 aaKnown RBP11.92□□□□□ -0.5
CBX3-203ENST00000409747 NEK6Q9HC98 313 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 FOXJ3Q9UPW0 622 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 PCDHGB5Q9Y5G0 923 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 SESN1Q9Y6P5 492 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 MINOS1-NBL1R4GNA1 71 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 DSCAML1Q8TD84 2053 aa11.92□□□□□ -0.5
CBX3-203ENST00000409747 DAPL1A0PJW8 107 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 TMEM82A0PJX8 343 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 MGST3O14880 152 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 SLC16A6O15403 523 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 VSIG10L2P0DP72 767 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 ATF1P18846 271 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 SLC25A30Q5SVS4 291 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 FDX2Q6P4F2 183 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 RDH10Q8IZV5 341 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 ZNF676Q8N7Q3 588 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 RNFT2Q96EX2 444 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 ADAT3Q96EY9 351 aaPredicted RBP11.91□□□□□ -0.5
CBX3-203ENST00000409747 HRASLS5Q96KN8 279 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 OPALINQ96PE5 141 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 RBFOX1Q9NWB1 397 aaKnown RBP11.91□□□□□ -0.5
CBX3-203ENST00000409747 A0A0G2JK05 382 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 FUOMA2VDF0 154 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 A6NDX4 124 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 F2RL2O00254 374 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 ENTPD6O75354 484 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 IGHA1P01876 353 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 OPN1MWP04001 364 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 ALPLP05186 524 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 RPSAP08865 295 aaKnown RBP11.91□□□□□ -0.5
CBX3-203ENST00000409747 HTR1AP08908 422 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 OPN1MW2P0DN77 364 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 OPN1MW3P0DN78 364 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 PRKACAP17612 351 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 ERP29P30040 261 aaKnown RBP11.91□□□□□ -0.5
CBX3-203ENST00000409747 CCR9P51686 369 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 SNRPGP62308 76 aaKnown RBP11.91□□□□□ -0.5
CBX3-203ENST00000409747 TCF23Q7RTU1 214 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 TRAPPC6BQ86SZ2 158 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 DYNAPQ8N1N2 210 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 Q8N2B8 174 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 MBOAT4Q96T53 435 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 PRSS22Q9GZN4 317 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 CHST6Q9GZX3 395 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 ZNF702PQ9H963 129 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 RHOFQ9HBH0 211 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 FRRS1LQ9P0K9 344 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 HHLA2Q9UM44 414 aa11.91□□□□□ -0.5
CBX3-203ENST00000409747 UBE2J1Q9Y385 318 aaPredicted RBP11.91□□□□□ -0.5
CBX3-203ENST00000409747 PRKDCP78527 4128 aaKnown RBP11.9□□□□□ -0.5
CBX3-203ENST00000409747 IGHV2-26A0A0B4J1V2 119 aa11.9□□□□□ -0.5
CBX3-203ENST00000409747 IGKV1-9A0A0C4DH69 117 aa11.9□□□□□ -0.5
CBX3-203ENST00000409747 MEX3AA1L020 520 aaKnown RBP11.9□□□□□ -0.5
CBX3-203ENST00000409747 PEX14O75381 377 aa11.9□□□□□ -0.5
CBX3-203ENST00000409747 ALDOBP05062 364 aa11.9□□□□□ -0.5
CBX3-203ENST00000409747 BCL3P20749 454 aa11.9□□□□□ -0.5
CBX3-203ENST00000409747 P2RX3P56373 397 aa11.9□□□□□ -0.5
CBX3-203ENST00000409747 PDZK1IP1Q13113 114 aa11.9□□□□□ -0.5
CBX3-203ENST00000409747 IL18R1Q13478 541 aa11.9□□□□□ -0.5
CBX3-203ENST00000409747 C11orf44Q8N8P7 122 aa11.9□□□□□ -0.5
CBX3-203ENST00000409747 OR13C3Q8NGS6 347 aa11.9□□□□□ -0.5
CBX3-203ENST00000409747 NDNFQ8TB73 568 aa11.9□□□□□ -0.5
CBX3-203ENST00000409747 PYDC1Q8WXC3 89 aa11.9□□□□□ -0.5
CBX3-203ENST00000409747 FGGYQ96C11 551 aa11.9□□□□□ -0.5
CBX3-203ENST00000409747 CLEC7AQ9BXN2 247 aa11.9□□□□□ -0.5
CBX3-203ENST00000409747 GAL3ST2Q9H3Q3 398 aa11.9□□□□□ -0.5
CBX3-203ENST00000409747 EXOSC4Q9NPD3 245 aaKnown RBP11.9□□□□□ -0.5
CBX3-203ENST00000409747 IL36RNQ9UBH0 155 aa11.9□□□□□ -0.5
CBX3-203ENST00000409747 J3QRE1 110 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 EI24O14681 340 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 SH2D1BO14796 132 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 PSPNO60542 156 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 FBXO24O75426 580 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 MT-ND2P03891 347 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 NPBWR2P48146 333 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 RAB13P51153 203 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 ARSJQ5FYB0 599 aaPredicted RBP11.89□□□□□ -0.51
CBX3-203ENST00000409747 OR52W1Q6IF63 320 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 ZFP1Q6P2D0 407 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 TMEM219Q86XT9 240 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 C1QL4Q86Z23 238 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 ACBD7Q8N6N7 88 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 TPRX1Q8N7U7 411 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 OR52N4Q8NGI2 321 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 RNF166Q96A37 237 aaPredicted RBP11.89□□□□□ -0.51
CBX3-203ENST00000409747 TMEM133Q9H2Q1 129 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 HMG20AQ9NP66 347 aa11.89□□□□□ -0.51
CBX3-203ENST00000409747 TRGV10A0A0A0MS01 117 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms