RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 DOK3Q7L591 496 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 OR2G3Q8NGZ4 309 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 M1APQ8TC57 530 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 ZNF721Q8TF20 911 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 TOMM40LQ969M1 308 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 TVP23CQ96ET8 276 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 NAA60Q9H7X0 242 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 DECR2Q9NUI1 292 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 KIAA1456Q9P272 454 aa13.49□□□□□ -0.25
LIMS2-205ENST00000409455 PHF3Q92576 2039 aaKnown RBP13.48□□□□□ -0.25
LIMS2-205ENST00000409455 IGHV5-10-1A0A0J9YXX1 117 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 ZNF17P17021 662 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 EFNA3P52797 238 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 BIDP55957 195 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 GNMTQ14749 295 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 LYZL2Q7Z4W2 148 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 OR14K1Q8NGZ2 314 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 TMEM234Q8WY98 164 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 TSLPQ969D9 159 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 LURAP1Q96LR2 239 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 EMC6Q9BV81 110 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 AK3Q9UIJ7 227 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 LHFPL6Q9Y693 200 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 ASCC3Q8N3C0 2202 aaKnown RBP13.48□□□□□ -0.25
LIMS2-205ENST00000409455 IGKV1-9A0A0C4DH69 117 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 CA11O75493 328 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 CER1O95813 267 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 DDAH2O95865 285 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 SP9P0CG40 484 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 OR5H8P0DN80 308 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 CCL20P78556 96 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 TMEM187Q14656 261 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 HAGHQ16775 308 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 DMRTC1Q5HYR2 192 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 AKR1C8PQ5T2L2 129 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 SLC22A25Q6T423 547 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 UNQ6494/PRO21346Q6UXR6 183 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 C9orf40Q8IXQ3 194 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 PRSS58Q8IYP2 241 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 ZFP62Q8NB50 900 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-205ENST00000409455 SSC4DQ8WTU2 575 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 NPRL2Q8WTW4 380 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 RTN4IP1Q8WWV3 396 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-205ENST00000409455 NAT6Q93015 286 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 PACRGQ96M98 296 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-205ENST00000409455 ZNF700Q9H0M5 742 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 PCNX3Q9H6A9 2034 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 ELL3Q9HB65 397 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-205ENST00000409455 CHST11Q9NPF2 352 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 PLEKHJ1Q9NW61 149 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 MCTS1Q9ULC4 181 aaKnown RBP13.48□□□□□ -0.25
LIMS2-205ENST00000409455 RCL1Q9Y2P8 373 aaKnown RBP13.48□□□□□ -0.25
LIMS2-205ENST00000409455 HS3ST3B1Q9Y662 390 aa13.48□□□□□ -0.25
LIMS2-205ENST00000409455 A0A1B0GX78 115 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 FAM230AA0A1W2PPH8 454 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 SRP19P09132 144 aaKnown RBP13.47□□□□□ -0.25
LIMS2-205ENST00000409455 FBLP22087 321 aaKnown RBP13.47□□□□□ -0.25
LIMS2-205ENST00000409455 GLIPR1P48060 266 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 BEND4Q6ZU67 534 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 C1QL2Q7Z5L3 287 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 OR52M1Q8NGK5 317 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 IFI44Q8TCB0 444 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 OR6C1Q96RD1 312 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 SUCNR1Q9BXA5 334 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 ANXA10Q9UJ72 324 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 LIPGQ9Y5X9 500 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 TTC28Q96AY4 2481 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 CDRT15L2A8MXV6 281 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 STMND1H3BQB6 276 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 TRGC1P0CF51 173 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 ZNF728P0DKX0 622 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 TMEM225BP0DP42 221 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 CCL1P22362 96 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 SFTPDP35247 375 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 SPCS3P61009 180 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 EWSR1Q01844 656 aaKnown RBP eCLIP13.47□□□□□ -0.25
LIMS2-205ENST00000409455 C6orf201Q7Z4U5 140 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 RABEPKQ7Z6M1 372 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 SLC35E3Q7Z769 313 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 CYB561D1Q8N8Q1 229 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 SLC38A9Q8NBW4 561 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 OR10AD1Q8NGE0 317 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 OR5R1Q8NH85 324 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 OR14L1PQ8NHC6 308 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 C2orf88Q9BSF0 95 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 TM2D1Q9BX74 207 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 FAM86C1Q9NVL1 165 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 ZNF319Q9P2F9 582 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 MMACHCQ9Y4U1 282 aa13.47□□□□□ -0.25
LIMS2-205ENST00000409455 SMCO3A2RU48 225 aa13.46□□□□□ -0.25
LIMS2-205ENST00000409455 TIAF1O95411 115 aa13.46□□□□□ -0.25
LIMS2-205ENST00000409455 HSPB1P04792 205 aaKnown RBP13.46□□□□□ -0.25
LIMS2-205ENST00000409455 ZNF43P17038 809 aa13.46□□□□□ -0.25
LIMS2-205ENST00000409455 ALDH3B1P43353 468 aa13.46□□□□□ -0.25
LIMS2-205ENST00000409455 GABREP78334 506 aa13.46□□□□□ -0.25
LIMS2-205ENST00000409455 TCEAL6Q6IPX3 200 aa13.46□□□□□ -0.25
LIMS2-205ENST00000409455 FAM57BQ71RH2 274 aa13.46□□□□□ -0.25
LIMS2-205ENST00000409455 C1orf87Q8N0U7 546 aa13.46□□□□□ -0.25
LIMS2-205ENST00000409455 LRTM2Q8N967 370 aa13.46□□□□□ -0.25
LIMS2-205ENST00000409455 REEP6Q96HR9 211 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms