RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 CST9LP1Q5W188 147 aa11.37□□□□□ -0.59
PTPRN-202ENST00000409251 OR11L1Q8NGX0 322 aa11.37□□□□□ -0.59
PTPRN-202ENST00000409251 FAM210BQ96KR6 192 aa11.37□□□□□ -0.59
PTPRN-202ENST00000409251 SCGB3A2Q96PL1 93 aa11.37□□□□□ -0.59
PTPRN-202ENST00000409251 AQP10Q96PS8 301 aa11.37□□□□□ -0.59
PTPRN-202ENST00000409251 PRDM13Q9H4Q3 707 aa11.37□□□□□ -0.59
PTPRN-202ENST00000409251 ARGFXA6NJG6 315 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 DDAH2O95865 285 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 IL2RAP01589 272 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 PGA3P0DJD8 388 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 HIST1H1BP16401 226 aaKnown RBP11.36□□□□□ -0.59
PTPRN-202ENST00000409251 HIST1H1DP16402 221 aaKnown RBP11.36□□□□□ -0.59
PTPRN-202ENST00000409251 CD33P20138 364 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 ERVS71-1P61550 626 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 ZNF117Q03924 483 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 TLE3Q04726 772 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 PPA1Q15181 289 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 MPV17LQ2QL34 196 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 C10orf91Q5T1B1 145 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 PMS2CLQ68D20 193 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 OPN5Q6U736 354 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 CLDN23Q96B33 292 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 SLAMF6Q96DU3 332 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 RNF122Q9H9V4 155 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 TMEM131Q92545 1883 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 FCGR2AP12318 317 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 SFTPDP35247 375 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 BIDP55957 195 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 TAS2R60P59551 318 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 REC114Q7Z4M0 266 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 ATG4DQ86TL0 474 aaPredicted RBP11.36□□□□□ -0.59
PTPRN-202ENST00000409251 CATSPERDQ86XM0 798 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 OR52M1Q8NGK5 317 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 NEK7Q8TDX7 302 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 SAP25Q8TEE9 199 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 CABLES2Q9BTV7 478 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 PBOV1Q9GZY1 135 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 PLA2G3Q9NZ20 509 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 OR14J1Q9UGF5 321 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 EML5Q05BV3 1969 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 SEC14L6B5MCN3 397 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 FUT7Q11130 342 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 C1QL2Q7Z5L3 287 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 LRRC18Q8N456 261 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 ZNF721Q8TF20 911 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 RTBDNQ9BSG5 229 aaPredicted RBP11.36□□□□□ -0.59
PTPRN-202ENST00000409251 OR10A2Q9H208 303 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 WFDC1Q9HC57 220 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 LAMP3Q9UQV4 416 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 PCNX2A6NKB5 2137 aa11.36□□□□□ -0.59
PTPRN-202ENST00000409251 A0A1W2PPQ1 181 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 A6NIZ1 184 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 EREGO14944 169 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 RER1O15258 196 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 RAP1BP61224 184 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 SSBP1Q04837 148 aaKnown RBP11.35□□□□□ -0.59
PTPRN-202ENST00000409251 SPEM2Q0P670 501 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 MYPOPQ86VE0 399 aaPredicted RBP11.35□□□□□ -0.59
PTPRN-202ENST00000409251 D2HGDHQ8N465 521 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 ZFHX4Q86UP3 3567 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 DSPP15924 2871 aaKnown RBP11.35□□□□□ -0.59
PTPRN-202ENST00000409251 IGKV1D-8A0A087WSZ0 117 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 GNRHRP30968 328 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 PKIAP61925 76 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 PLPP5Q8NEB5 264 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 RPS4Y2Q8TD47 263 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 LPAR5Q9H1C0 372 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 PILRBQ9UKJ0 227 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 PTRH2Q9Y3E5 179 aaKnown RBP11.35□□□□□ -0.59
PTPRN-202ENST00000409251 MUC6Q6W4X9 2439 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 TMED7-TICAM2A0A0A6YYA0 188 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 RBFOX3A6NFN3 312 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 OR2J2O76002 312 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 FOLR2P14207 255 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 IL2RGP31785 369 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 MMP16P51512 607 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 RND3P61587 244 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 RPS16P62249 146 aaKnown RBP11.35□□□□□ -0.59
PTPRN-202ENST00000409251 HEPN1Q6WQI6 88 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 COMMD1Q8N668 190 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 TMEM105Q8N8V8 129 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 POC1AQ8NBT0 407 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 RTN4IP1Q8WWV3 396 aaPredicted RBP11.35□□□□□ -0.59
PTPRN-202ENST00000409251 GNRHR2Q96P88 292 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 RALGAPA1Q6GYQ0 2036 aa11.35□□□□□ -0.59
PTPRN-202ENST00000409251 A0A1B0GTQ1 180 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 A8MVM7 634 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 TAAR5O14804 337 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 GPR137BO60478 399 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 ASAH2BP0C7U1 165 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 FAHP16930 419 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 CSRP1P21291 193 aaKnown RBP11.34□□□□□ -0.59
PTPRN-202ENST00000409251 NCR3LG1Q68D85 454 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 C5orf24Q7Z6I8 188 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 RPUSD4Q96CM3 377 aaKnown RBP11.34□□□□□ -0.59
PTPRN-202ENST00000409251 FAAP24Q9BTP7 215 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 SLC17A5Q9NRA2 495 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 SUSD2Q9UGT4 822 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 A0A0A6YYD4 124 aa11.34□□□□□ -0.59
PTPRN-202ENST00000409251 H3BMH7 237 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms