RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 SFTPDP35247 375 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 GAMTQ14353 236 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 PPA1Q15181 289 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 RSU1Q15404 277 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 RTL6Q6ICC9 239 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 SLC22A25Q6T423 547 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 UNQ6494/PRO21346Q6UXR6 183 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 SLC35G3Q8N808 338 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 POC1BQ8TC44 478 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 MSI2Q96DH6 328 aaKnown RBP12.17□□□□□ -0.46
APOB-202ENST00000399256 SUCNR1Q9BXA5 334 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 PRO1933Q9H354 126 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 SDHAF3Q9NRP4 125 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 IGSF23A1L1A6 192 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 ZNF726A6NNF4 738 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 SLC33A1O00400 549 aaPredicted RBP12.17□□□□□ -0.46
APOB-202ENST00000399256 CA11O75493 328 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 DBHP09172 617 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 ZNF133P52736 654 aaPredicted RBP12.17□□□□□ -0.46
APOB-202ENST00000399256 NKX6-1P78426 367 aaPredicted RBP12.17□□□□□ -0.46
APOB-202ENST00000399256 KHDC3LQ587J8 217 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 LGI3Q8N145 548 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 CCDC54Q8NEL0 328 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 UFSP2Q9NUQ7 469 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 ZNF724A8MTY0 619 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 SEC14L6B5MCN3 397 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 ZNF587BE7ETH6 402 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 PPP1R2P9O14990 202 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 F10P00742 488 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 MTCP1P56278 107 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 MRPS21P82921 87 aaKnown RBP12.17□□□□□ -0.46
APOB-202ENST00000399256 P4HA3Q7Z4N8 544 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 OR2C3Q8N628 320 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 HSF4Q9ULV5 492 aa12.17□□□□□ -0.46
APOB-202ENST00000399256 CCDC163A0A0D9SF12 145 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 FAM230AA0A1W2PPH8 454 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 FOLR1P15328 257 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 HIST1H1BP16401 226 aaKnown RBP12.16□□□□□ -0.46
APOB-202ENST00000399256 SSX9Q7RTT3 188 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 HIST3H2BBQ8N257 126 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 RLN3Q8WXF3 142 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 MVB12AQ96EY5 273 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 ZDHHC12Q96GR4 267 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 GUCD1Q96NT3 240 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 MAGT1Q9H0U3 335 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 GPR27Q9NS67 375 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 SLC7A11Q9UPY5 501 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 V9GYS6 101 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 FABP4P15090 132 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 SSTP61278 116 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 ICAM4Q14773 271 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 OR4D5Q8NGN0 318 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 OR6X1Q8NH79 312 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 OR14L1PQ8NHC6 308 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 HLA-CQ95604 372 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 TP53RKQ96S44 253 aa12.16□□□□□ -0.46
APOB-202ENST00000399256 UNKLQ9H9P5 680 aaKnown RBP12.16□□□□□ -0.46
APOB-202ENST00000399256 NKX2-6A6NCS4 301 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 FOSL1P15407 271 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 RBP2P50120 134 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 PDCD1Q15116 288 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 PLPPR5Q32ZL2 321 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 C4orf17Q53FE4 359 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 OR2T2Q6IF00 324 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 FBXL14Q8N1E6 418 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 LRTM2Q8N967 370 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 TMEM171Q8WVE6 324 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 PP6455Q8WZ26 134 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 SMDT1Q9H4I9 107 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 LAMA1P25391 3075 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 SSSCA1O60232 199 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 SCAF4O95104 1147 aaKnown RBP12.15□□□□□ -0.46
APOB-202ENST00000399256 IGLV3-1P01715 115 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 SUMO3P55854 103 aaPredicted RBP12.15□□□□□ -0.46
APOB-202ENST00000399256 CLDN17P56750 224 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 OR1D5P58170 312 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 RUNX1Q01196 453 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 D2HGDHQ8N465 521 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 GTF3AQ92664 365 aaKnown RBP12.15□□□□□ -0.46
APOB-202ENST00000399256 TVP23CQ96ET8 276 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 TMED3Q9Y3Q3 217 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 WSB1Q9Y6I7 421 aa12.15□□□□□ -0.46
APOB-202ENST00000399256 A0A087WWC5 75 aa12.15□□□□□ -0.47
APOB-202ENST00000399256 SHISA7A6NL88 538 aa12.15□□□□□ -0.47
APOB-202ENST00000399256 NXPH3O95157 252 aa12.15□□□□□ -0.47
APOB-202ENST00000399256 DRD1P21728 446 aa12.15□□□□□ -0.47
APOB-202ENST00000399256 ZNF266Q14584 549 aa12.15□□□□□ -0.47
APOB-202ENST00000399256 NIPSNAP3BQ9BS92 247 aa12.15□□□□□ -0.47
APOB-202ENST00000399256 METTL9Q9H1A3 318 aa12.15□□□□□ -0.47
APOB-202ENST00000399256 KIAA1456Q9P272 454 aa12.15□□□□□ -0.47
APOB-202ENST00000399256 NCOA6Q14686 2063 aaPredicted RBP12.14□□□□□ -0.47
APOB-202ENST00000399256 TRGC1P0CF51 173 aa12.14□□□□□ -0.47
APOB-202ENST00000399256 SELLP14151 372 aa12.14□□□□□ -0.47
APOB-202ENST00000399256 CCR5P51681 352 aa12.14□□□□□ -0.47
APOB-202ENST00000399256 PIGYQ3MUY2 71 aa12.14□□□□□ -0.47
APOB-202ENST00000399256 DMRTC2Q8IXT2 367 aaPredicted RBP12.14□□□□□ -0.47
APOB-202ENST00000399256 TMEM217Q8N7C4 229 aa12.14□□□□□ -0.47
APOB-202ENST00000399256 OR2AE1Q8NHA4 323 aa12.14□□□□□ -0.47
APOB-202ENST00000399256 TGIF2Q9GZN2 237 aa12.14□□□□□ -0.47
APOB-202ENST00000399256 FER1L5A0AVI2 2057 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms