RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 GPR173Q9NS66 373 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 TAS2R1Q9NYW7 299 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 DPM3Q9P2X0 92 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 SLC7A11Q9UPY5 501 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 LINC00312Q9Y6C7 94 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 SESN1Q9Y6P5 492 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 V9GYS6 101 aa7□□□□□ -1.29
CAPN3-208ENST00000397204 IGHV2-26A0A0B4J1V2 119 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 A0A1B0GTI1 187 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 WI2-2373I1.2A0A1W2PRP0 233 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 B2RBV5 119 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 E9PQ18 207 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 LOC110117498-PIK3R3F6TDL0 507 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 GNGT2O14610 69 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 SRSF10O75494 262 aaKnown RBP6.99□□□□□ -1.29
CAPN3-208ENST00000397204 DCTN3O75935 186 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 DNAJC8O75937 253 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-208ENST00000397204 ANXA8P13928 327 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 PEX2P28328 305 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 ARHGDIBP52566 201 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 KRTAP10-11P60412 298 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 MS4A2Q01362 244 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 CD69Q07108 199 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 DCTN2Q13561 401 aaKnown RBP6.99□□□□□ -1.29
CAPN3-208ENST00000397204 SNAPC1Q16533 368 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 TMEM95Q3KNT9 176 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 OR52W1Q6IF63 320 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 C11orf87Q6NUJ2 197 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 ENTHD1Q8IYW4 607 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 ZNF676Q8N7Q3 588 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 OR4X2Q8NGF9 303 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 OR14K1Q8NGZ2 314 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 MYDGFQ969H8 173 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 CEP19Q96LK0 163 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 MNTQ99583 582 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 B9D2Q9BPU9 175 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 APOL4Q9BPW4 351 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 KRTAP4-12Q9BQ66 201 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 CLEC7AQ9BXN2 247 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 FAM107BQ9H098 131 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 TMEM133Q9H2Q1 129 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 MOB1AQ9H8S9 216 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 SLC25A19Q9HC21 320 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 TVP23BQ9NYZ1 205 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 MTCH1Q9NZJ7 389 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 ZMAT5Q9UDW3 170 aaKnown RBP6.99□□□□□ -1.29
CAPN3-208ENST00000397204 IKZF2Q9UKS7 526 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 ARL2BPQ9Y2Y0 163 aa6.99□□□□□ -1.29
CAPN3-208ENST00000397204 TMEM82A0PJX8 343 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 MEX3AA1L020 520 aaKnown RBP6.98□□□□□ -1.29
CAPN3-208ENST00000397204 PRR32B1ATL7 298 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 F8VVB4 439 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 F8VWA3 439 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 M0QZK8 103 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 ERP29P30040 261 aaKnown RBP6.98□□□□□ -1.29
CAPN3-208ENST00000397204 FUT6P51993 359 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 BDH1Q02338 343 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 BCL2L15Q5TBC7 163 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 ZNF322Q6U7Q0 402 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-208ENST00000397204 TMEM179BQ7Z7N9 219 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 RTN4RL2Q86UN3 420 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 BATF2Q8N1L9 274 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 ABHD12Q8N2K0 398 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 CCDC54Q8NEL0 328 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 DPF1Q92782 380 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 CREB3L1Q96BA8 519 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 NSL1Q96IY1 281 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 LRGUKQ96M69 825 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 RBM14Q96PK6 669 aaKnown RBP6.98□□□□□ -1.29
CAPN3-208ENST00000397204 GLS2Q9UI32 602 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 OR52A1Q9UKL2 312 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 HHLA2Q9UM44 414 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 GTF2A1LQ9UNN4 478 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 UBE2J1Q9Y385 318 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-208ENST00000397204 SNX5Q9Y5X3 404 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 R4GMQ9 66 aa6.98□□□□□ -1.29
CAPN3-208ENST00000397204 FAM230AA0A1W2PPH8 454 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 CCDC182A6NF36 153 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 A6NIN4 97 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 LEUTXA8MZ59 168 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 MGST3O14880 152 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 OR2F2O95006 317 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 SERPINA3P01011 423 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 LPLP06858 475 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 MRPL3P09001 348 aaKnown RBP6.97□□□□□ -1.29
CAPN3-208ENST00000397204 NHLRC4P0CG21 123 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-208ENST00000397204 CCL1P22362 96 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 PRKACGP22612 351 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 GABRR1P24046 479 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 SLC6A1P30531 599 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 CEACAM3P40198 252 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 CRISP1P54107 249 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 CBX1P83916 185 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 MFGE8Q08431 387 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-208ENST00000397204 UBE2V2Q15819 145 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 GRK1Q15835 563 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 ABCA11PQ4W5N1 156 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 TMEM236Q5W0B7 351 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 UNQ9370/PRO34162Q6UXP9 181 aa6.97□□□□□ -1.29
CAPN3-208ENST00000397204 HEPN1Q6WQI6 88 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms