RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 ARR3P36575 388 aa16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 H3F3CQ6NXT2 135 aa16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 FIP1L1Q6UN15 594 aaKnown RBP16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 CXorf67Q86X51 503 aaPredicted RBP16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 BVESQ8NE79 360 aa16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 SAV1Q9H4B6 383 aaPredicted RBP16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 STARD10Q9Y365 291 aa16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 PRRC2CQ9Y520 2896 aaKnown RBP16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 LYZL6O75951 148 aa16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 BCL3P20749 454 aa16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 CD80P33681 288 aa16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 PMP22Q01453 160 aa16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 KCNMB1Q16558 191 aa16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 ZNF766Q5HY98 468 aa16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 PRSS54Q6PEW0 395 aa16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 DEFB124Q8NES8 71 aa16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 OR11L1Q8NGX0 322 aa16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 SPIN2AQ99865 258 aa16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 SPIN2BQ9BPZ2 258 aa16.34■□□□□ 0.21
SMARCC2-203ENST00000394023 ANOS1P23352 680 aa16.33■□□□□ 0.21
SMARCC2-203ENST00000394023 NPBWR2P48146 333 aa16.33■□□□□ 0.21
SMARCC2-203ENST00000394023 H3F3AP84243 136 aa16.33■□□□□ 0.21
SMARCC2-203ENST00000394023 TMEM65Q6PI78 240 aa16.33■□□□□ 0.21
SMARCC2-203ENST00000394023 VHLLQ6RSH7 139 aa16.33■□□□□ 0.21
SMARCC2-203ENST00000394023 OR10AD1Q8NGE0 317 aa16.33■□□□□ 0.21
SMARCC2-203ENST00000394023 FAM96BQ9Y3D0 163 aa16.33■□□□□ 0.21
SMARCC2-203ENST00000394023 C10orf142B7Z368 130 aa16.33■□□□□ 0.21
SMARCC2-203ENST00000394023 TSC22D1Q15714 1073 aa16.33■□□□□ 0.21
SMARCC2-203ENST00000394023 AADACL3Q5VUY0 350 aa16.33■□□□□ 0.21
SMARCC2-203ENST00000394023 RGS7BPQ6MZT1 257 aaPredicted RBP16.33■□□□□ 0.21
SMARCC2-203ENST00000394023 C17orf78Q8N4C9 275 aa16.33■□□□□ 0.21
SMARCC2-203ENST00000394023 FAM213BQ8TBF2 198 aa16.33■□□□□ 0.21
SMARCC2-203ENST00000394023 SLC2A8Q9NY64 477 aa16.33■□□□□ 0.21
SMARCC2-203ENST00000394023 NGFP01138 241 aa16.33■□□□□ 0.2
SMARCC2-203ENST00000394023 LYZL2Q7Z4W2 148 aa16.33■□□□□ 0.2
SMARCC2-203ENST00000394023 SVBPQ8N300 66 aa16.33■□□□□ 0.2
SMARCC2-203ENST00000394023 ESRP2Q9H6T0 727 aaKnown RBP16.33■□□□□ 0.2
SMARCC2-203ENST00000394023 TBC1D28Q2M2D7 210 aa16.33■□□□□ 0.2
SMARCC2-203ENST00000394023 PRRX2Q99811 253 aa16.33■□□□□ 0.2
SMARCC2-203ENST00000394023 GPR87Q9BY21 358 aa16.33■□□□□ 0.2
SMARCC2-203ENST00000394023 GLS2Q9UI32 602 aa16.33■□□□□ 0.2
SMARCC2-203ENST00000394023 S100A6P06703 90 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 FAM3AP98173 230 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 RPUSD3Q6P087 351 aaKnown RBP16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 DUSP13Q9UII6 198 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 ZFHX2Q9C0A1 2572 aaPredicted RBP16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 TRIP6Q15654 476 aaKnown RBP16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 Q6ZRG5 221 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 KCNIP1Q9NZI2 227 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 FREM1Q5H8C1 2179 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 CD300LBA8K4G0 201 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 C9orf172C9J069 976 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 WDR1O75083 606 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 SP9P0CG40 484 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 AADACP22760 399 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 CALCRP30988 508 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 HOXA6P31267 233 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 CSRP2Q16527 193 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 NABP1Q96AH0 204 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 NMES1Q9C002 83 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 LUZP4Q9P127 313 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 TECTAO75443 2155 aa16.32■□□□□ 0.2
SMARCC2-203ENST00000394023 IGKV1D-8A0A087WSZ0 117 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 FCGR3AP08637 254 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 HOXD11P31277 338 aaPredicted RBP16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 NKX2-1P43699 371 aaPredicted RBP16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 C10orf35Q96D05 121 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 ZFP57Q9NU63 452 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 KIAA2026Q5HYC2 2103 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 H3BP45 60 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 LINC01387J3KSC0 135 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 SYNGR3O43761 229 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 MPGP29372 298 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 FABP6P51161 128 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 FOXG1P55316 489 aaPredicted RBP16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 IGSF11Q5DX21 431 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 OVCH2Q7RTZ1 564 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 WNT2BQ93097 391 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 Q96M66 194 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 RASL12Q9NYN1 266 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 PPP1R3CQ9UQK1 317 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 SPAARA0A1B0GVQ0 90 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 G3V3Q6 166 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 SSSCA1O60232 199 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 TUSC2O75896 110 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 OR10J5Q8NHC4 309 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 SLC2A9Q9NRM0 540 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 FAM212BQ9NTI7 297 aaPredicted RBP16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 ZNF581Q9P0T4 197 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 FBXL17Q9UF56 701 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 ZNF391Q9UJN7 358 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 FZR1Q9UM11 496 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 LHX6Q9UPM6 363 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 OR6C65A6NJZ3 312 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 ONECUT2O95948 504 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 SLC25A4P12235 298 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 RCC1P18754 421 aaPredicted RBP16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 ACP1P24666 158 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 PTGER4P35408 488 aa16.31■□□□□ 0.2
SMARCC2-203ENST00000394023 RBM39Q14498 530 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms